Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 AC122714.2-201ENST00000502787 707 ntBASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 AC109462.3-201ENST00000573934 613 ntBASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 AC124864.1-201ENST00000623408 392 ntBASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
FOXP3Q9BZS1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
FOXP3Q9BZS1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 Z69720.1-201ENST00000601483 472 ntBASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 AC104692.2-201ENST00000603054 253 ntBASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 AL592071.1-201ENST00000611956 408 ntBASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXP3Q9BZS1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 RNF216P1-203ENST00000404404 2427 ntBASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 AC103564.2-201ENST00000432853 1299 ntBASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 AL160237.2-201ENST00000556165 472 ntBASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 CYP2T1P-202ENST00000641596 2535 ntBASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXP3Q9BZS1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.68■□□□□ 0.42
FOXP3Q9BZS1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms