Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 PCDHA1-201ENST00000378133 2726 ntBASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 SNX33P1-201ENST00000592116 1762 ntBASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 KRT16P4-201ENST00000453883 522 ntBASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 AC091076.1-201ENST00000610741 619 ntBASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 AC243591.1-201ENST00000452967 1364 ntBASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO3Q9BXY4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 LINC00895-201ENST00000629028 1637 ntBASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 ARMC10P1-201ENST00000313754 855 ntBASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 TERC-201ENST00000602385 541 ntBASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 AC093458.2-201ENST00000623150 629 ntBASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
RSPO3Q9BXY4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO3Q9BXY4 AC046158.3-201ENST00000624947 2558 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms