Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP4Q9BWG4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13□□□□□ -0.33
SSBP4Q9BWG4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP4Q9BWG4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP4Q9BWG4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP4Q9BWG4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC13□□□□□ -0.33
SSBP4Q9BWG4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP4Q9BWG4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SSBP4Q9BWG4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP4Q9BWG4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP4Q9BWG4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SSBP4Q9BWG4 CCR12P-201ENST00000446203 998 ntBASIC13□□□□□ -0.33
SSBP4Q9BWG4 AC113404.2-201ENST00000507884 177 ntBASIC13□□□□□ -0.33
SSBP4Q9BWG4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC13□□□□□ -0.33
SSBP4Q9BWG4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC13□□□□□ -0.33
SSBP4Q9BWG4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP4Q9BWG4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13□□□□□ -0.33
SSBP4Q9BWG4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13□□□□□ -0.33
SSBP4Q9BWG4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13□□□□□ -0.33
SSBP4Q9BWG4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP4Q9BWG4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP4Q9BWG4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SSBP4Q9BWG4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13□□□□□ -0.33
SSBP4Q9BWG4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP4Q9BWG4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SSBP4Q9BWG4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP4Q9BWG4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP4Q9BWG4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP4Q9BWG4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13□□□□□ -0.33
SSBP4Q9BWG4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP4Q9BWG4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SSBP4Q9BWG4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 AL365209.1-201ENST00000624418 6473 ntBASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 ABHD17AP1-201ENST00000358206 933 ntBASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 AL355355.2-201ENST00000442321 338 ntBASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 SEC1P-202ENST00000473944 940 ntBASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 AC092666.2-201ENST00000613287 246 ntBASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP4Q9BWG4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSBP4Q9BWG4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms