Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.2■□□□□ 0.02
VRK1Q99986 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
VRK1Q99986 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
VRK1Q99986 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.2■□□□□ 0.02
VRK1Q99986 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
VRK1Q99986 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
VRK1Q99986 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.19■□□□□ 0.02
VRK1Q99986 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
VRK1Q99986 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
VRK1Q99986 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.19■□□□□ 0.02
VRK1Q99986 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
VRK1Q99986 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.19■□□□□ 0.02
VRK1Q99986 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
VRK1Q99986 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.19■□□□□ 0.02
VRK1Q99986 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.19■□□□□ 0.02
VRK1Q99986 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.19■□□□□ 0.02
VRK1Q99986 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.19■□□□□ 0.02
VRK1Q99986 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
VRK1Q99986 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.19■□□□□ 0.02
VRK1Q99986 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
VRK1Q99986 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.19■□□□□ 0.02
VRK1Q99986 SLC25A6P4-201ENST00000586535 553 ntBASIC15.19■□□□□ 0.02
VRK1Q99986 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.19■□□□□ 0.02
VRK1Q99986 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.19■□□□□ 0.02
VRK1Q99986 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.19■□□□□ 0.02
VRK1Q99986 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
VRK1Q99986 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.19■□□□□ 0.02
VRK1Q99986 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.19■□□□□ 0.02
VRK1Q99986 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
VRK1Q99986 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
VRK1Q99986 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
VRK1Q99986 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
VRK1Q99986 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
VRK1Q99986 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK1Q99986 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VRK1Q99986 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
VRK1Q99986 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.18■□□□□ 0.02
VRK1Q99986 AC022898.2-201ENST00000616822 1312 ntBASIC15.18■□□□□ 0.02
VRK1Q99986 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VRK1Q99986 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.18■□□□□ 0.02
VRK1Q99986 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
VRK1Q99986 AL096828.2-201ENST00000567259 1965 ntBASIC15.18■□□□□ 0.02
VRK1Q99986 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VRK1Q99986 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VRK1Q99986 PCDHB19P-201ENST00000570871 2371 ntBASIC15.18■□□□□ 0.02
VRK1Q99986 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.18■□□□□ 0.02
VRK1Q99986 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.18■□□□□ 0.02
VRK1Q99986 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
VRK1Q99986 INTS4P1-201ENST00000438455 1935 ntBASIC15.18■□□□□ 0.02
VRK1Q99986 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
VRK1Q99986 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.18■□□□□ 0.02
VRK1Q99986 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VRK1Q99986 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.18■□□□□ 0.02
VRK1Q99986 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VRK1Q99986 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.18■□□□□ 0.02
VRK1Q99986 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.18■□□□□ 0.02
VRK1Q99986 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
VRK1Q99986 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VRK1Q99986 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VRK1Q99986 AC011467.2-201ENST00000598425 242 ntBASIC15.18■□□□□ 0.02
VRK1Q99986 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
VRK1Q99986 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.18■□□□□ 0.02
VRK1Q99986 TP73-AS1-207ENST00000624167 988 ntBASIC15.18■□□□□ 0.02
VRK1Q99986 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.18■□□□□ 0.02
VRK1Q99986 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.18■□□□□ 0.02
VRK1Q99986 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VRK1Q99986 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
VRK1Q99986 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VRK1Q99986 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
VRK1Q99986 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms