Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.36□□□□□ -0.11
CCL13Q99616 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.36□□□□□ -0.11
CCL13Q99616 FDX1P1-201ENST00000449115 551 ntBASIC14.36□□□□□ -0.11
CCL13Q99616 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.36□□□□□ -0.11
CCL13Q99616 AC092910.1-201ENST00000482027 1129 ntBASIC14.36□□□□□ -0.11
CCL13Q99616 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.36□□□□□ -0.11
CCL13Q99616 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.36□□□□□ -0.11
CCL13Q99616 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.36□□□□□ -0.11
CCL13Q99616 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.36□□□□□ -0.11
CCL13Q99616 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCL13Q99616 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.36□□□□□ -0.11
CCL13Q99616 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.36□□□□□ -0.11
CCL13Q99616 MIR7706-201ENST00000613747 67 ntBASIC14.36□□□□□ -0.11
CCL13Q99616 MIR1199-201ENST00000621445 119 ntBASIC14.36□□□□□ -0.11
CCL13Q99616 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.36□□□□□ -0.11
CCL13Q99616 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.36□□□□□ -0.11
CCL13Q99616 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL13Q99616 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CCL13Q99616 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL13Q99616 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCL13Q99616 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.36□□□□□ -0.11
CCL13Q99616 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL13Q99616 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL13Q99616 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL13Q99616 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.36□□□□□ -0.11
CCL13Q99616 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CCL13Q99616 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.36□□□□□ -0.11
CCL13Q99616 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCL13Q99616 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCL13Q99616 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCL13Q99616 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCL13Q99616 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
CCL13Q99616 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CCL13Q99616 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CCL13Q99616 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL13Q99616 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CCL13Q99616 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 PTCHD3P3-201ENST00000403073 906 ntBASIC14.35□□□□□ -0.11
CCL13Q99616 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCL13Q99616 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.35□□□□□ -0.11
CCL13Q99616 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL13Q99616 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.35□□□□□ -0.11
CCL13Q99616 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL13Q99616 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.35□□□□□ -0.11
CCL13Q99616 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL13Q99616 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.35□□□□□ -0.11
CCL13Q99616 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.35□□□□□ -0.11
CCL13Q99616 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCL13Q99616 GPR89P-201ENST00000407924 1495 ntBASIC14.35□□□□□ -0.11
CCL13Q99616 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCL13Q99616 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CCL13Q99616 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 LINC02012-201ENST00000608206 1725 ntBASIC14.35□□□□□ -0.11
CCL13Q99616 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.35□□□□□ -0.11
CCL13Q99616 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL13Q99616 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCL13Q99616 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCL13Q99616 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL13Q99616 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCL13Q99616 AC073621.1-201ENST00000392730 636 ntBASIC14.34□□□□□ -0.11
CCL13Q99616 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.34□□□□□ -0.11
CCL13Q99616 KRT18P27-201ENST00000427733 1299 ntBASIC14.34□□□□□ -0.11
CCL13Q99616 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
CCL13Q99616 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 AC136632.2-201ENST00000512891 861 ntBASIC14.34□□□□□ -0.11
CCL13Q99616 RNA5SP419-201ENST00000515908 135 ntBASIC14.34□□□□□ -0.11
CCL13Q99616 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCL13Q99616 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms