Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC107918.2-201ENST00000530817 355 ntBASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 AL590560.3-201ENST00000623350 461 ntBASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSMD1Q96PZ7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 DFFBP1-201ENST00000433250 979 ntBASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 AC004840.1-201ENST00000636359 365 ntBASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 ALG1L8P-201ENST00000533887 760 ntBASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 GMCL1P1-201ENST00000463439 1581 ntBASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSMD1Q96PZ7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 RN7SL837P-201ENST00000463010 287 ntBASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms