Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.15■□□□□ 0.5
CALR3Q96L12 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
CALR3Q96L12 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.15■□□□□ 0.5
CALR3Q96L12 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.15■□□□□ 0.5
CALR3Q96L12 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.15■□□□□ 0.5
CALR3Q96L12 AC073592.5-201ENST00000624854 528 ntBASIC18.15■□□□□ 0.5
CALR3Q96L12 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.15■□□□□ 0.5
CALR3Q96L12 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CALR3Q96L12 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
CALR3Q96L12 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
CALR3Q96L12 CYP2T1P-202ENST00000641596 2535 ntBASIC18.14■□□□□ 0.49
CALR3Q96L12 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CALR3Q96L12 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CALR3Q96L12 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CALR3Q96L12 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CALR3Q96L12 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CALR3Q96L12 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
CALR3Q96L12 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CALR3Q96L12 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CALR3Q96L12 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CALR3Q96L12 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.14■□□□□ 0.49
CALR3Q96L12 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.14■□□□□ 0.49
CALR3Q96L12 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CALR3Q96L12 AC211429.1-201ENST00000415277 523 ntBASIC18.14■□□□□ 0.49
CALR3Q96L12 CHCHD2P8-201ENST00000429873 447 ntBASIC18.14■□□□□ 0.49
CALR3Q96L12 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CALR3Q96L12 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.14■□□□□ 0.49
CALR3Q96L12 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.14■□□□□ 0.49
CALR3Q96L12 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.14■□□□□ 0.49
CALR3Q96L12 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.14■□□□□ 0.49
CALR3Q96L12 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.14■□□□□ 0.49
CALR3Q96L12 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.14■□□□□ 0.49
CALR3Q96L12 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.14■□□□□ 0.49
CALR3Q96L12 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CALR3Q96L12 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.14■□□□□ 0.49
CALR3Q96L12 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.14■□□□□ 0.49
CALR3Q96L12 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.14■□□□□ 0.49
CALR3Q96L12 AL121672.3-201ENST00000608644 468 ntBASIC18.14■□□□□ 0.49
CALR3Q96L12 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.14■□□□□ 0.49
CALR3Q96L12 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
CALR3Q96L12 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
CALR3Q96L12 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CALR3Q96L12 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CALR3Q96L12 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.14■□□□□ 0.49
CALR3Q96L12 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CALR3Q96L12 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.13■□□□□ 0.49
CALR3Q96L12 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.13■□□□□ 0.49
CALR3Q96L12 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.13■□□□□ 0.49
CALR3Q96L12 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CALR3Q96L12 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CALR3Q96L12 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.13■□□□□ 0.49
CALR3Q96L12 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
CALR3Q96L12 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CALR3Q96L12 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.13■□□□□ 0.49
CALR3Q96L12 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.13■□□□□ 0.49
CALR3Q96L12 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CALR3Q96L12 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CALR3Q96L12 AL136379.1-201ENST00000623471 2642 ntBASIC18.13■□□□□ 0.49
CALR3Q96L12 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CALR3Q96L12 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.13■□□□□ 0.49
CALR3Q96L12 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CALR3Q96L12 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CALR3Q96L12 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.13■□□□□ 0.49
CALR3Q96L12 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CALR3Q96L12 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CALR3Q96L12 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.13■□□□□ 0.49
CALR3Q96L12 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.13■□□□□ 0.49
CALR3Q96L12 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.13■□□□□ 0.49
CALR3Q96L12 BX276092.5-203ENST00000456199 560 ntBASIC18.13■□□□□ 0.49
CALR3Q96L12 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.13■□□□□ 0.49
CALR3Q96L12 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.13■□□□□ 0.49
CALR3Q96L12 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CALR3Q96L12 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.13■□□□□ 0.49
CALR3Q96L12 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.13■□□□□ 0.49
CALR3Q96L12 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CALR3Q96L12 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CALR3Q96L12 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CALR3Q96L12 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CALR3Q96L12 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CALR3Q96L12 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CALR3Q96L12 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CALR3Q96L12 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CALR3Q96L12 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CALR3Q96L12 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CALR3Q96L12 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.13■□□□□ 0.49
CALR3Q96L12 AL662844.4-201ENST00000606367 2838 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms