Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAX2Q96IS3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.4□□□□□ -0.26
RAX2Q96IS3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RAX2Q96IS3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.4□□□□□ -0.26
RAX2Q96IS3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAX2Q96IS3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RAX2Q96IS3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAX2Q96IS3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RAX2Q96IS3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RAX2Q96IS3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAX2Q96IS3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAX2Q96IS3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAX2Q96IS3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAX2Q96IS3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAX2Q96IS3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.4□□□□□ -0.26
RAX2Q96IS3 AC097637.2-201ENST00000624096 1997 ntBASIC13.4□□□□□ -0.27
RAX2Q96IS3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.39□□□□□ -0.27
RAX2Q96IS3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC13.39□□□□□ -0.27
RAX2Q96IS3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.39□□□□□ -0.27
RAX2Q96IS3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 AC007326.2-201ENST00000624224 7579 ntBASIC13.39□□□□□ -0.27
RAX2Q96IS3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.39□□□□□ -0.27
RAX2Q96IS3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.39□□□□□ -0.27
RAX2Q96IS3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
RAX2Q96IS3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.39□□□□□ -0.27
RAX2Q96IS3 AC007967.2-201ENST00000432613 625 ntBASIC13.39□□□□□ -0.27
RAX2Q96IS3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.39□□□□□ -0.27
RAX2Q96IS3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
RAX2Q96IS3 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.39□□□□□ -0.27
RAX2Q96IS3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.39□□□□□ -0.27
RAX2Q96IS3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.39□□□□□ -0.27
RAX2Q96IS3 AL139424.1-201ENST00000607572 797 ntBASIC13.39□□□□□ -0.27
RAX2Q96IS3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
RAX2Q96IS3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.39□□□□□ -0.27
RAX2Q96IS3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.39□□□□□ -0.27
RAX2Q96IS3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
RAX2Q96IS3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.39□□□□□ -0.27
RAX2Q96IS3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.39□□□□□ -0.27
RAX2Q96IS3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.39□□□□□ -0.27
RAX2Q96IS3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAX2Q96IS3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
RAX2Q96IS3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.38□□□□□ -0.27
RAX2Q96IS3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAX2Q96IS3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAX2Q96IS3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAX2Q96IS3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.38□□□□□ -0.27
RAX2Q96IS3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RAX2Q96IS3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAX2Q96IS3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
RAX2Q96IS3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RAX2Q96IS3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.38□□□□□ -0.27
RAX2Q96IS3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAX2Q96IS3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.38□□□□□ -0.27
RAX2Q96IS3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RAX2Q96IS3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAX2Q96IS3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAX2Q96IS3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
RAX2Q96IS3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAX2Q96IS3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAX2Q96IS3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAX2Q96IS3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RAX2Q96IS3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAX2Q96IS3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC13.38□□□□□ -0.27
RAX2Q96IS3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC13.38□□□□□ -0.27
RAX2Q96IS3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.38□□□□□ -0.27
RAX2Q96IS3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.38□□□□□ -0.27
RAX2Q96IS3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.38□□□□□ -0.27
RAX2Q96IS3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RAX2Q96IS3 BX842568.4-201ENST00000421222 227 ntBASIC13.38□□□□□ -0.27
RAX2Q96IS3 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.38□□□□□ -0.27
RAX2Q96IS3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.38□□□□□ -0.27
RAX2Q96IS3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms