Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM11Q96F44 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.12■□□□□ 0.49
TRIM11Q96F44 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM11Q96F44 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.12■□□□□ 0.49
TRIM11Q96F44 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM11Q96F44 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM11Q96F44 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM11Q96F44 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TRIM11Q96F44 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM11Q96F44 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM11Q96F44 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM11Q96F44 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM11Q96F44 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.12■□□□□ 0.49
TRIM11Q96F44 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM11Q96F44 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM11Q96F44 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM11Q96F44 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRIM11Q96F44 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM11Q96F44 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM11Q96F44 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM11Q96F44 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM11Q96F44 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM11Q96F44 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM11Q96F44 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM11Q96F44 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM11Q96F44 AL118508.1-201ENST00000613502 2345 ntBASIC18.11■□□□□ 0.49
TRIM11Q96F44 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM11Q96F44 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM11Q96F44 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM11Q96F44 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM11Q96F44 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM11Q96F44 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM11Q96F44 AC106795.1-205ENST00000512851 1056 ntBASIC18.11■□□□□ 0.49
TRIM11Q96F44 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM11Q96F44 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRIM11Q96F44 AP001269.4-201ENST00000609611 512 ntBASIC18.11■□□□□ 0.49
TRIM11Q96F44 AL021920.2-201ENST00000624828 1351 ntBASIC18.11■□□□□ 0.49
TRIM11Q96F44 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM11Q96F44 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM11Q96F44 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM11Q96F44 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM11Q96F44 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM11Q96F44 AC078925.2-201ENST00000624013 1973 ntBASIC18.11■□□□□ 0.49
TRIM11Q96F44 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM11Q96F44 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
TRIM11Q96F44 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM11Q96F44 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM11Q96F44 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM11Q96F44 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM11Q96F44 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM11Q96F44 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM11Q96F44 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRIM11Q96F44 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM11Q96F44 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
TRIM11Q96F44 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRIM11Q96F44 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TRIM11Q96F44 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRIM11Q96F44 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM11Q96F44 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM11Q96F44 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM11Q96F44 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM11Q96F44 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM11Q96F44 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM11Q96F44 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.1■□□□□ 0.49
TRIM11Q96F44 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM11Q96F44 MIR1224-201ENST00000408193 85 ntBASIC18.1■□□□□ 0.49
TRIM11Q96F44 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM11Q96F44 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRIM11Q96F44 AC132008.2-207ENST00000454517 770 ntBASIC18.1■□□□□ 0.49
TRIM11Q96F44 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM11Q96F44 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRIM11Q96F44 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.1■□□□□ 0.49
TRIM11Q96F44 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.1■□□□□ 0.49
TRIM11Q96F44 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.1■□□□□ 0.49
TRIM11Q96F44 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 AL139288.1-201ENST00000623748 933 ntBASIC18.1■□□□□ 0.49
TRIM11Q96F44 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM11Q96F44 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRIM11Q96F44 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM11Q96F44 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms