Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF31Q96EP0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF31Q96EP0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF31Q96EP0 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.56■□□□□ 0.24
RNF31Q96EP0 RPS15P9-201ENST00000494093 319 ntBASIC16.56■□□□□ 0.24
RNF31Q96EP0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.56■□□□□ 0.24
RNF31Q96EP0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.56■□□□□ 0.24
RNF31Q96EP0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
RNF31Q96EP0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RNF31Q96EP0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.56■□□□□ 0.24
RNF31Q96EP0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.56■□□□□ 0.24
RNF31Q96EP0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF31Q96EP0 AL078644.1-201ENST00000609881 752 ntBASIC16.56■□□□□ 0.24
RNF31Q96EP0 AC134684.3-201ENST00000641758 218 ntBASIC16.56■□□□□ 0.24
RNF31Q96EP0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF31Q96EP0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
RNF31Q96EP0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF31Q96EP0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF31Q96EP0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF31Q96EP0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF31Q96EP0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF31Q96EP0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
RNF31Q96EP0 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF31Q96EP0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF31Q96EP0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
RNF31Q96EP0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RNF31Q96EP0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF31Q96EP0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF31Q96EP0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF31Q96EP0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 BX276092.7-203ENST00000637198 1536 ntBASIC16.55■□□□□ 0.24
RNF31Q96EP0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF31Q96EP0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF31Q96EP0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF31Q96EP0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF31Q96EP0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF31Q96EP0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF31Q96EP0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF31Q96EP0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF31Q96EP0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 HTR5BP-201ENST00000430851 1154 ntBASIC16.55■□□□□ 0.24
RNF31Q96EP0 SIGLEC30P-201ENST00000455569 941 ntBASIC16.55■□□□□ 0.24
RNF31Q96EP0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF31Q96EP0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 AC040169.1-201ENST00000565382 521 ntBASIC16.55■□□□□ 0.24
RNF31Q96EP0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF31Q96EP0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF31Q96EP0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF31Q96EP0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF31Q96EP0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF31Q96EP0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF31Q96EP0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF31Q96EP0 REXO1L11P-201ENST00000620964 1927 ntBASIC16.55■□□□□ 0.24
RNF31Q96EP0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RNF31Q96EP0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RNF31Q96EP0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF31Q96EP0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF31Q96EP0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF31Q96EP0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF31Q96EP0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF31Q96EP0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF31Q96EP0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF31Q96EP0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF31Q96EP0 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF31Q96EP0 AC003669.1-201ENST00000334569 611 ntBASIC16.54■□□□□ 0.24
RNF31Q96EP0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF31Q96EP0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF31Q96EP0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF31Q96EP0 PTCHD3P3-201ENST00000403073 906 ntBASIC16.54■□□□□ 0.24
RNF31Q96EP0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF31Q96EP0 IGHV3-52-201ENST00000519770 353 ntBASIC16.54■□□□□ 0.24
RNF31Q96EP0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF31Q96EP0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF31Q96EP0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.54■□□□□ 0.24
RNF31Q96EP0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF31Q96EP0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF31Q96EP0 STK25P1-201ENST00000585406 838 ntBASIC16.54■□□□□ 0.24
RNF31Q96EP0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF31Q96EP0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms