Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.4■□□□□ 0.06
CPNE4Q96A23 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CPNE4Q96A23 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.4■□□□□ 0.06
CPNE4Q96A23 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE4Q96A23 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE4Q96A23 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE4Q96A23 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
CPNE4Q96A23 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE4Q96A23 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE4Q96A23 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE4Q96A23 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.4■□□□□ 0.06
CPNE4Q96A23 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE4Q96A23 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.4■□□□□ 0.06
CPNE4Q96A23 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.4■□□□□ 0.06
CPNE4Q96A23 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.4■□□□□ 0.06
CPNE4Q96A23 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.4■□□□□ 0.06
CPNE4Q96A23 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.4■□□□□ 0.06
CPNE4Q96A23 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.4■□□□□ 0.06
CPNE4Q96A23 IGHV3-22-201ENST00000520721 359 ntBASIC15.4■□□□□ 0.06
CPNE4Q96A23 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.4■□□□□ 0.06
CPNE4Q96A23 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CPNE4Q96A23 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CPNE4Q96A23 GGTLC5P-201ENST00000617623 998 ntBASIC15.4■□□□□ 0.06
CPNE4Q96A23 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CPNE4Q96A23 AC117500.6-201ENST00000624871 588 ntBASIC15.4■□□□□ 0.06
CPNE4Q96A23 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.4■□□□□ 0.06
CPNE4Q96A23 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE4Q96A23 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CPNE4Q96A23 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE4Q96A23 CROCCP2-202ENST00000412962 2773 ntBASIC15.4■□□□□ 0.06
CPNE4Q96A23 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CPNE4Q96A23 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CPNE4Q96A23 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE4Q96A23 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE4Q96A23 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE4Q96A23 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE4Q96A23 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE4Q96A23 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE4Q96A23 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE4Q96A23 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE4Q96A23 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE4Q96A23 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE4Q96A23 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE4Q96A23 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE4Q96A23 AC008667.4-201ENST00000607370 168 ntBASIC15.39■□□□□ 0.05
CPNE4Q96A23 EGFEM1P-202ENST00000431685 1563 ntBASIC15.39■□□□□ 0.05
CPNE4Q96A23 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE4Q96A23 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE4Q96A23 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE4Q96A23 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE4Q96A23 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CPNE4Q96A23 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE4Q96A23 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE4Q96A23 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE4Q96A23 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE4Q96A23 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE4Q96A23 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CPNE4Q96A23 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.38■□□□□ 0.05
CPNE4Q96A23 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE4Q96A23 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE4Q96A23 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CPNE4Q96A23 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE4Q96A23 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CPNE4Q96A23 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE4Q96A23 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE4Q96A23 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE4Q96A23 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.38■□□□□ 0.05
CPNE4Q96A23 PTCHD3P3-201ENST00000403073 906 ntBASIC15.38■□□□□ 0.05
CPNE4Q96A23 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.38■□□□□ 0.05
CPNE4Q96A23 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.38■□□□□ 0.05
CPNE4Q96A23 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CPNE4Q96A23 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.38■□□□□ 0.05
CPNE4Q96A23 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE4Q96A23 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE4Q96A23 AF228730.7-201ENST00000641842 219 ntBASIC15.38■□□□□ 0.05
CPNE4Q96A23 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CPNE4Q96A23 AC046158.3-201ENST00000624947 2558 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms