Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP6V0A1Q93050 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 FAM58CP-201ENST00000435741 640 ntBASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 CROCCP2-202ENST00000412962 2773 ntBASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 LETM1P2-201ENST00000597330 2178 ntBASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A1Q93050 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ATP6V0A1Q93050 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 AC129492.6-201ENST00000611383 1305 ntBASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 SLC25A6P2-201ENST00000497974 877 ntBASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A1Q93050 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ATP6V0A1Q93050 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.09■□□□□ 0.65
ATP6V0A1Q93050 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
ATP6V0A1Q93050 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP6V0A1Q93050 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ATP6V0A1Q93050 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ATP6V0A1Q93050 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP6V0A1Q93050 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP6V0A1Q93050 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP6V0A1Q93050 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP6V0A1Q93050 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP6V0A1Q93050 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP6V0A1Q93050 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.09■□□□□ 0.65
ATP6V0A1Q93050 ACTG1P14-201ENST00000446382 1122 ntBASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms