Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
SEMA4DQ92854 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SEMA4DQ92854 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SEMA4DQ92854 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEMA4DQ92854 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SEMA4DQ92854 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEMA4DQ92854 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SEMA4DQ92854 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEMA4DQ92854 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SEMA4DQ92854 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SEMA4DQ92854 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEMA4DQ92854 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEMA4DQ92854 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.4■□□□□ 0.54
SEMA4DQ92854 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.4■□□□□ 0.54
SEMA4DQ92854 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SEMA4DQ92854 AL805961.1-202ENST00000641562 540 ntBASIC18.4■□□□□ 0.54
SEMA4DQ92854 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEMA4DQ92854 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.4■□□□□ 0.54
SEMA4DQ92854 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEMA4DQ92854 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEMA4DQ92854 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.4■□□□□ 0.54
SEMA4DQ92854 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.4■□□□□ 0.54
SEMA4DQ92854 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.4■□□□□ 0.54
SEMA4DQ92854 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.4■□□□□ 0.54
SEMA4DQ92854 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEMA4DQ92854 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SEMA4DQ92854 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.39■□□□□ 0.54
SEMA4DQ92854 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SEMA4DQ92854 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4DQ92854 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4DQ92854 FLJ38576-201ENST00000623820 2459 ntBASIC18.39■□□□□ 0.53
SEMA4DQ92854 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SEMA4DQ92854 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.39■□□□□ 0.53
SEMA4DQ92854 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.39■□□□□ 0.53
SEMA4DQ92854 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4DQ92854 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.39■□□□□ 0.53
SEMA4DQ92854 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4DQ92854 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.39■□□□□ 0.53
SEMA4DQ92854 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.39■□□□□ 0.53
SEMA4DQ92854 AL031284.1-201ENST00000419297 478 ntBASIC18.39■□□□□ 0.53
SEMA4DQ92854 TPM4P1-201ENST00000436100 807 ntBASIC18.39■□□□□ 0.53
SEMA4DQ92854 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4DQ92854 AC105339.3-201ENST00000560043 636 ntBASIC18.39■□□□□ 0.53
SEMA4DQ92854 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.39■□□□□ 0.53
SEMA4DQ92854 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.39■□□□□ 0.53
SEMA4DQ92854 AL773604.1-201ENST00000617417 272 ntBASIC18.39■□□□□ 0.53
SEMA4DQ92854 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4DQ92854 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4DQ92854 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4DQ92854 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
SEMA4DQ92854 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4DQ92854 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4DQ92854 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4DQ92854 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4DQ92854 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.39■□□□□ 0.53
SEMA4DQ92854 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4DQ92854 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4DQ92854 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.39■□□□□ 0.53
SEMA4DQ92854 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4DQ92854 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SEMA4DQ92854 AC078925.2-201ENST00000624013 1973 ntBASIC18.39■□□□□ 0.53
SEMA4DQ92854 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4DQ92854 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SEMA4DQ92854 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4DQ92854 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4DQ92854 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4DQ92854 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4DQ92854 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4DQ92854 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4DQ92854 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4DQ92854 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.38■□□□□ 0.53
SEMA4DQ92854 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4DQ92854 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4DQ92854 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4DQ92854 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.38■□□□□ 0.53
SEMA4DQ92854 RPS15P9-201ENST00000494093 319 ntBASIC18.38■□□□□ 0.53
SEMA4DQ92854 AC136632.2-201ENST00000512891 861 ntBASIC18.38■□□□□ 0.53
SEMA4DQ92854 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.38■□□□□ 0.53
SEMA4DQ92854 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.38■□□□□ 0.53
SEMA4DQ92854 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.38■□□□□ 0.53
SEMA4DQ92854 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.38■□□□□ 0.53
SEMA4DQ92854 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.38■□□□□ 0.53
SEMA4DQ92854 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.38■□□□□ 0.53
SEMA4DQ92854 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4DQ92854 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.38■□□□□ 0.53
SEMA4DQ92854 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4DQ92854 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4DQ92854 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4DQ92854 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.38■□□□□ 0.53
SEMA4DQ92854 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.38■□□□□ 0.53
SEMA4DQ92854 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4DQ92854 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4DQ92854 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SEMA4DQ92854 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.38■□□□□ 0.53
SEMA4DQ92854 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.38■□□□□ 0.53
SEMA4DQ92854 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4DQ92854 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4DQ92854 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SEMA4DQ92854 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SEMA4DQ92854 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms