Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 LINC01711-201ENST00000598340 967 ntBASIC16.04■□□□□ 0.16
NUP43Q8NFH3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 AL022326.1-202ENST00000641533 845 ntBASIC16.04■□□□□ 0.16
NUP43Q8NFH3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NUP43Q8NFH3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.03■□□□□ 0.16
NUP43Q8NFH3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 AC008608.2-201ENST00000606089 416 ntBASIC16.03■□□□□ 0.16
NUP43Q8NFH3 AL355877.3-201ENST00000622820 899 ntBASIC16.03■□□□□ 0.16
NUP43Q8NFH3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUP43Q8NFH3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 AC064862.7-201ENST00000604520 867 ntBASIC16.02■□□□□ 0.16
NUP43Q8NFH3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.02■□□□□ 0.16
NUP43Q8NFH3 AC012313.10-201ENST00000623509 926 ntBASIC16.02■□□□□ 0.16
NUP43Q8NFH3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NUP43Q8NFH3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
NUP43Q8NFH3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms