Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 FAM197Y8-203ENST00000450145 560 ntBASIC15.01□□□□□ -0.01
CPEB3Q8NE35 RNPS1P1-201ENST00000507437 918 ntBASIC15.01□□□□□ -0.01
CPEB3Q8NE35 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 AC104692.2-201ENST00000603054 253 ntBASIC15.01□□□□□ -0.01
CPEB3Q8NE35 AL589182.2-201ENST00000619332 1049 ntBASIC15.01□□□□□ -0.01
CPEB3Q8NE35 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPEB3Q8NE35 NCF1C-201ENST00000438382 1427 ntBASIC15□□□□□ -0.01
CPEB3Q8NE35 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CPEB3Q8NE35 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15□□□□□ -0.01
CPEB3Q8NE35 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
CPEB3Q8NE35 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15□□□□□ -0.01
CPEB3Q8NE35 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15□□□□□ -0.01
CPEB3Q8NE35 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15□□□□□ -0.01
CPEB3Q8NE35 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15□□□□□ -0.01
CPEB3Q8NE35 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15□□□□□ -0.01
CPEB3Q8NE35 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CPEB3Q8NE35 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15□□□□□ -0.01
CPEB3Q8NE35 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15□□□□□ -0.01
CPEB3Q8NE35 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15□□□□□ -0.01
CPEB3Q8NE35 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15□□□□□ -0.01
CPEB3Q8NE35 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15□□□□□ -0.01
CPEB3Q8NE35 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15□□□□□ -0.01
CPEB3Q8NE35 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CPEB3Q8NE35 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CPEB3Q8NE35 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15□□□□□ -0.01
CPEB3Q8NE35 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CPEB3Q8NE35 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15□□□□□ -0.01
CPEB3Q8NE35 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15□□□□□ -0.01
CPEB3Q8NE35 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CPEB3Q8NE35 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms