Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.55■□□□□ 0.4
RTL3Q8N8U3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTL3Q8N8U3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTL3Q8N8U3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTL3Q8N8U3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 AC087163.2-201ENST00000457299 853 ntBASIC17.54■□□□□ 0.4
RTL3Q8N8U3 RNA5SP415-201ENST00000517246 115 ntBASIC17.54■□□□□ 0.4
RTL3Q8N8U3 UNC93B6-202ENST00000528242 690 ntBASIC17.54■□□□□ 0.4
RTL3Q8N8U3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTL3Q8N8U3 AC012313.1-201ENST00000593393 3059 ntBASIC17.53■□□□□ 0.4
RTL3Q8N8U3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 AC108073.2-201ENST00000464002 357 ntBASIC17.53■□□□□ 0.4
RTL3Q8N8U3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.53■□□□□ 0.4
RTL3Q8N8U3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RTL3Q8N8U3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTL3Q8N8U3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RTL3Q8N8U3 IL9RP2-201ENST00000423948 1312 ntBASIC17.52■□□□□ 0.4
RTL3Q8N8U3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.52■□□□□ 0.4
RTL3Q8N8U3 AC092068.3-201ENST00000587894 2016 ntBASIC17.52■□□□□ 0.4
RTL3Q8N8U3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTL3Q8N8U3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTL3Q8N8U3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.52■□□□□ 0.4
RTL3Q8N8U3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RTL3Q8N8U3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTL3Q8N8U3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.52■□□□□ 0.4
RTL3Q8N8U3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTL3Q8N8U3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.52■□□□□ 0.4
RTL3Q8N8U3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTL3Q8N8U3 AL590627.1-203ENST00000421194 1026 ntBASIC17.52■□□□□ 0.4
RTL3Q8N8U3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.52■□□□□ 0.4
RTL3Q8N8U3 AC009947.1-201ENST00000444350 727 ntBASIC17.52■□□□□ 0.4
RTL3Q8N8U3 AC108751.1-201ENST00000490852 363 ntBASIC17.52■□□□□ 0.4
RTL3Q8N8U3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.52■□□□□ 0.4
RTL3Q8N8U3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.52■□□□□ 0.4
RTL3Q8N8U3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RTL3Q8N8U3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.52■□□□□ 0.4
RTL3Q8N8U3 BX640515.1-201ENST00000617215 977 ntBASIC17.52■□□□□ 0.4
RTL3Q8N8U3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RTL3Q8N8U3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.52■□□□□ 0.39
RTL3Q8N8U3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RTL3Q8N8U3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RTL3Q8N8U3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms