Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 AC022211.2-201ENST00000585075 2527 ntBASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 PMS2P1-201ENST00000431037 1228 ntBASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 RPS15P9-201ENST00000494093 319 ntBASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDH20Q8N6Y1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDH20Q8N6Y1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
PCDH20Q8N6Y1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH20Q8N6Y1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDH20Q8N6Y1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH20Q8N6Y1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
PCDH20Q8N6Y1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH20Q8N6Y1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDH20Q8N6Y1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 AP002414.1-201ENST00000391405 1147 ntBASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 AC009947.1-201ENST00000444350 727 ntBASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 AC034105.1-201ENST00000563488 319 ntBASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 AC008667.4-201ENST00000607370 168 ntBASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 AL138688.1-201ENST00000624851 1594 ntBASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PCDH20Q8N6Y1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 AL590787.1-201ENST00000568856 1315 ntBASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 MIR574-201ENST00000385209 96 ntBASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 PTCHD3P3-201ENST00000403073 906 ntBASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 AC108751.1-201ENST00000490852 363 ntBASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 IGHV3-65-201ENST00000523210 341 ntBASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 KRT18P58-201ENST00000527480 1120 ntBASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms