Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 LETM1P2-201ENST00000597330 2178 ntBASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.69■□□□□ 0.26
RAB42Q8N4Z0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 AC026396.1-201ENST00000419388 421 ntBASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB42Q8N4Z0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 AP002414.1-201ENST00000391405 1147 ntBASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 MRPL3P1-201ENST00000400109 1033 ntBASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 SLC25A6P4-201ENST00000586535 553 ntBASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 AL356488.2-201ENST00000602755 427 ntBASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 GGTLC5P-201ENST00000617623 998 ntBASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 AL590787.1-201ENST00000568856 1315 ntBASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB42Q8N4Z0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms