Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 PIN1P1-201ENST00000412108 996 ntBASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 AC108860.2-201ENST00000562760 2183 ntBASIC15.9■□□□□ 0.14
COL27A1Q8IZC6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 API5-211ENST00000534695 560 ntTSL 5 BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.89■□□□□ 0.13
COL27A1Q8IZC6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 U91328.1-201ENST00000437528 223 ntBASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL27A1Q8IZC6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 AC079776.1-201ENST00000401540 1152 ntBASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL27A1Q8IZC6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms