Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 EMBP1-201ENST00000458200 901 ntBASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 AC025062.2-201ENST00000605477 670 ntBASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC65Q8IXS2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CCDC65Q8IXS2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19■□□□□ 0.63
CCDC65Q8IXS2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCDC65Q8IXS2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC65Q8IXS2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC65Q8IXS2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC65Q8IXS2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC65Q8IXS2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19■□□□□ 0.63
CCDC65Q8IXS2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19■□□□□ 0.63
CCDC65Q8IXS2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19■□□□□ 0.63
CCDC65Q8IXS2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19■□□□□ 0.63
CCDC65Q8IXS2 AC004706.3-202ENST00000621574 984 ntBASIC19■□□□□ 0.63
CCDC65Q8IXS2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC65Q8IXS2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CCDC65Q8IXS2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC65Q8IXS2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC65Q8IXS2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC65Q8IXS2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC65Q8IXS2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC65Q8IXS2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19■□□□□ 0.63
CCDC65Q8IXS2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC65Q8IXS2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC65Q8IXS2 AC105020.1-201ENST00000435356 2205 ntBASIC19■□□□□ 0.63
CCDC65Q8IXS2 AC005915.1-201ENST00000624912 2018 ntBASIC19■□□□□ 0.63
CCDC65Q8IXS2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC65Q8IXS2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19■□□□□ 0.63
CCDC65Q8IXS2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 AC009053.2-201ENST00000563701 2365 ntBASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 AP002414.1-201ENST00000391405 1147 ntBASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 AC073648.2-201ENST00000510116 352 ntBASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC65Q8IXS2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms