Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 AC236430.1-201ENST00000402231 743 ntBASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 AC002472.2-201ENST00000442739 958 ntBASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 TSPY16P-201ENST00000449843 468 ntBASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 IGHV3-42-201ENST00000520410 361 ntBASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 ALG1L8P-201ENST00000533887 760 ntBASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 AP000842.3-202ENST00000569238 1080 ntBASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 AC027307.2-201ENST00000591252 911 ntBASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 MIR6080-201ENST00000617359 66 ntBASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 AC135050.7-201ENST00000624508 2218 ntBASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 AL390754.1-201ENST00000619088 582 ntBASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS4Q8IUM7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 MIR346-201ENST00000362234 95 ntBASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 RN7SL204P-201ENST00000582831 262 ntBASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 AF228730.6-201ENST00000641497 218 ntBASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 AC084121.3-201ENST00000641716 218 ntBASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 AC105233.6-201ENST00000642093 218 ntBASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms