Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ALYREFQ86V81 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.99■□□□□ 0.47
ALYREFQ86V81 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ALYREFQ86V81 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALYREFQ86V81 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALYREFQ86V81 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ALYREFQ86V81 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALYREFQ86V81 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ALYREFQ86V81 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.98■□□□□ 0.47
ALYREFQ86V81 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ALYREFQ86V81 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALYREFQ86V81 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ALYREFQ86V81 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALYREFQ86V81 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.98■□□□□ 0.47
ALYREFQ86V81 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
ALYREFQ86V81 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ALYREFQ86V81 AC004945.1-201ENST00000416738 983 ntBASIC17.98■□□□□ 0.47
ALYREFQ86V81 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALYREFQ86V81 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.98■□□□□ 0.47
ALYREFQ86V81 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.98■□□□□ 0.47
ALYREFQ86V81 AC008761.3-201ENST00000624803 892 ntBASIC17.98■□□□□ 0.47
ALYREFQ86V81 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ALYREFQ86V81 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALYREFQ86V81 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ALYREFQ86V81 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALYREFQ86V81 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALYREFQ86V81 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
ALYREFQ86V81 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ALYREFQ86V81 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALYREFQ86V81 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ALYREFQ86V81 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALYREFQ86V81 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALYREFQ86V81 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.98■□□□□ 0.47
ALYREFQ86V81 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
ALYREFQ86V81 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
ALYREFQ86V81 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.97■□□□□ 0.47
ALYREFQ86V81 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.97■□□□□ 0.47
ALYREFQ86V81 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALYREFQ86V81 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.97■□□□□ 0.47
ALYREFQ86V81 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ALYREFQ86V81 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
ALYREFQ86V81 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ALYREFQ86V81 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALYREFQ86V81 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.97■□□□□ 0.47
ALYREFQ86V81 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
ALYREFQ86V81 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ALYREFQ86V81 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.97■□□□□ 0.47
ALYREFQ86V81 IGHV3-71-201ENST00000523324 359 ntBASIC17.97■□□□□ 0.47
ALYREFQ86V81 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.97■□□□□ 0.47
ALYREFQ86V81 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.97■□□□□ 0.47
ALYREFQ86V81 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ALYREFQ86V81 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.97■□□□□ 0.47
ALYREFQ86V81 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ALYREFQ86V81 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.97■□□□□ 0.47
ALYREFQ86V81 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALYREFQ86V81 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.97■□□□□ 0.47
ALYREFQ86V81 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALYREFQ86V81 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALYREFQ86V81 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.97■□□□□ 0.47
ALYREFQ86V81 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.97■□□□□ 0.47
ALYREFQ86V81 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALYREFQ86V81 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ALYREFQ86V81 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ALYREFQ86V81 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALYREFQ86V81 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALYREFQ86V81 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALYREFQ86V81 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.96■□□□□ 0.47
ALYREFQ86V81 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ALYREFQ86V81 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ALYREFQ86V81 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.96■□□□□ 0.47
ALYREFQ86V81 UGT1A2P-201ENST00000454886 866 ntBASIC17.96■□□□□ 0.47
ALYREFQ86V81 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.96■□□□□ 0.47
ALYREFQ86V81 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.96■□□□□ 0.47
ALYREFQ86V81 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ALYREFQ86V81 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.96■□□□□ 0.47
ALYREFQ86V81 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALYREFQ86V81 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALYREFQ86V81 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.96■□□□□ 0.47
ALYREFQ86V81 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALYREFQ86V81 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ALYREFQ86V81 RCC2P3-201ENST00000418112 1537 ntBASIC17.96■□□□□ 0.47
ALYREFQ86V81 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALYREFQ86V81 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALYREFQ86V81 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ALYREFQ86V81 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
ALYREFQ86V81 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.96■□□□□ 0.46
ALYREFQ86V81 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALYREFQ86V81 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ALYREFQ86V81 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ALYREFQ86V81 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.95■□□□□ 0.46
ALYREFQ86V81 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ALYREFQ86V81 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALYREFQ86V81 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALYREFQ86V81 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALYREFQ86V81 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALYREFQ86V81 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.95■□□□□ 0.46
ALYREFQ86V81 PHGDH-209ENST00000641074 1780 ntBASIC17.95■□□□□ 0.46
ALYREFQ86V81 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALYREFQ86V81 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
ALYREFQ86V81 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms