Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.4■□□□□ 0.38
DENND4AQ7Z401 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DENND4AQ7Z401 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DENND4AQ7Z401 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DENND4AQ7Z401 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
DENND4AQ7Z401 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.4■□□□□ 0.38
DENND4AQ7Z401 AC079776.1-201ENST00000401540 1152 ntBASIC17.4■□□□□ 0.38
DENND4AQ7Z401 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.4■□□□□ 0.38
DENND4AQ7Z401 AL512638.1-201ENST00000457493 794 ntBASIC17.4■□□□□ 0.38
DENND4AQ7Z401 PRYP6-201ENST00000514804 343 ntBASIC17.4■□□□□ 0.38
DENND4AQ7Z401 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.4■□□□□ 0.38
DENND4AQ7Z401 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.4■□□□□ 0.38
DENND4AQ7Z401 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
DENND4AQ7Z401 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
DENND4AQ7Z401 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.4■□□□□ 0.38
DENND4AQ7Z401 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
DENND4AQ7Z401 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.4■□□□□ 0.38
DENND4AQ7Z401 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.4■□□□□ 0.38
DENND4AQ7Z401 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DENND4AQ7Z401 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DENND4AQ7Z401 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
DENND4AQ7Z401 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DENND4AQ7Z401 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.4■□□□□ 0.38
DENND4AQ7Z401 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.4■□□□□ 0.38
DENND4AQ7Z401 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
DENND4AQ7Z401 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
DENND4AQ7Z401 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
DENND4AQ7Z401 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
DENND4AQ7Z401 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.39■□□□□ 0.38
DENND4AQ7Z401 AL138918.1-201ENST00000568306 659 ntBASIC17.39■□□□□ 0.38
DENND4AQ7Z401 AC004233.3-201ENST00000607794 1269 ntBASIC17.39■□□□□ 0.38
DENND4AQ7Z401 AL008721.1-201ENST00000609964 604 ntBASIC17.39■□□□□ 0.38
DENND4AQ7Z401 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.39■□□□□ 0.38
DENND4AQ7Z401 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.39■□□□□ 0.38
DENND4AQ7Z401 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.39■□□□□ 0.37
DENND4AQ7Z401 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 AL390961.4-201ENST00000623958 2535 ntBASIC17.38■□□□□ 0.37
DENND4AQ7Z401 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 NME2P1-201ENST00000426182 414 ntBASIC17.38■□□□□ 0.37
DENND4AQ7Z401 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 API5-211ENST00000534695 560 ntTSL 5 BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 HILS1-202ENST00000545329 423 ntBASIC17.38■□□□□ 0.37
DENND4AQ7Z401 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 NOC2LP1-202ENST00000452600 2235 ntBASIC17.38■□□□□ 0.37
DENND4AQ7Z401 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND4AQ7Z401 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 AC018529.1-201ENST00000613063 361 ntBASIC17.37■□□□□ 0.37
DENND4AQ7Z401 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.37■□□□□ 0.37
DENND4AQ7Z401 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms