Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 LINC02012-201ENST00000608206 1725 ntBASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 AC093909.1-201ENST00000504731 1122 ntBASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 GPR89P-201ENST00000407924 1495 ntBASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 AP001094.4-201ENST00000579008 2176 ntBASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
LYSMD3Q7Z3D4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYSMD3Q7Z3D4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LYSMD3Q7Z3D4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.21■□□□□ 0.34
LYSMD3Q7Z3D4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
LYSMD3Q7Z3D4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LYSMD3Q7Z3D4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 AC243591.1-201ENST00000452967 1364 ntBASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 AC092053.1-201ENST00000605787 1936 ntBASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms