Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 NEFHP1-201ENST00000412845 2629 ntBASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 AC133963.1-201ENST00000504166 1679 ntBASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 RN7SL589P-201ENST00000481268 310 ntBASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 INGX-202ENST00000489074 768 ntBASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 DUX4L27-201ENST00000554796 1261 ntBASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 AL390955.2-201ENST00000603032 514 ntBASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC149Q6ZUS6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 AC099522.2-201ENST00000607001 744 ntBASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC149Q6ZUS6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CCDC149Q6ZUS6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC149Q6ZUS6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC149Q6ZUS6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC149Q6ZUS6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms