Protein–RNA interactions for Protein: Q6NT52

CGB2, Choriogonadotropin subunit beta variant 2, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB2Q6NT52 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.78■□□□□ 0.28
CGB2Q6NT52 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.78■□□□□ 0.28
CGB2Q6NT52 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB2Q6NT52 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB2Q6NT52 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CGB2Q6NT52 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
CGB2Q6NT52 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB2Q6NT52 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.78■□□□□ 0.28
CGB2Q6NT52 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB2Q6NT52 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.78■□□□□ 0.28
CGB2Q6NT52 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB2Q6NT52 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CGB2Q6NT52 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB2Q6NT52 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.78■□□□□ 0.28
CGB2Q6NT52 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CGB2Q6NT52 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB2Q6NT52 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CGB2Q6NT52 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CGB2Q6NT52 ID1-201ENST00000376105 1233 ntBASIC16.78■□□□□ 0.28
CGB2Q6NT52 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB2Q6NT52 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.78■□□□□ 0.28
CGB2Q6NT52 MIR1238-201ENST00000408483 83 ntBASIC16.78■□□□□ 0.28
CGB2Q6NT52 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB2Q6NT52 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.78■□□□□ 0.28
CGB2Q6NT52 EGLN1P1-201ENST00000531623 762 ntBASIC16.78■□□□□ 0.28
CGB2Q6NT52 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CGB2Q6NT52 GCSHP2-201ENST00000560971 527 ntBASIC16.78■□□□□ 0.28
CGB2Q6NT52 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.78■□□□□ 0.28
CGB2Q6NT52 FAM87A-204ENST00000613235 858 ntBASIC16.78■□□□□ 0.28
CGB2Q6NT52 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CGB2Q6NT52 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CGB2Q6NT52 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB2Q6NT52 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB2Q6NT52 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.78■□□□□ 0.28
CGB2Q6NT52 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB2Q6NT52 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB2Q6NT52 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.78■□□□□ 0.28
CGB2Q6NT52 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CGB2Q6NT52 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB2Q6NT52 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CGB2Q6NT52 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB2Q6NT52 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGB2Q6NT52 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGB2Q6NT52 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGB2Q6NT52 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGB2Q6NT52 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGB2Q6NT52 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.77■□□□□ 0.28
CGB2Q6NT52 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CGB2Q6NT52 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGB2Q6NT52 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CGB2Q6NT52 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.77■□□□□ 0.28
CGB2Q6NT52 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.77■□□□□ 0.28
CGB2Q6NT52 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGB2Q6NT52 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CGB2Q6NT52 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.77■□□□□ 0.28
CGB2Q6NT52 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGB2Q6NT52 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGB2Q6NT52 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.77■□□□□ 0.28
CGB2Q6NT52 AC007967.3-201ENST00000434308 558 ntBASIC16.77■□□□□ 0.28
CGB2Q6NT52 KRT18P48-201ENST00000434763 852 ntBASIC16.77■□□□□ 0.28
CGB2Q6NT52 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.77■□□□□ 0.28
CGB2Q6NT52 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.77■□□□□ 0.28
CGB2Q6NT52 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGB2Q6NT52 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.77■□□□□ 0.28
CGB2Q6NT52 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGB2Q6NT52 AP001412.1-201ENST00000608405 714 ntBASIC16.77■□□□□ 0.28
CGB2Q6NT52 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGB2Q6NT52 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CGB2Q6NT52 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CGB2Q6NT52 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CGB2Q6NT52 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CGB2Q6NT52 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CGB2Q6NT52 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CGB2Q6NT52 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CGB2Q6NT52 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CGB2Q6NT52 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CGB2Q6NT52 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CGB2Q6NT52 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CGB2Q6NT52 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.77■□□□□ 0.27
CGB2Q6NT52 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CGB2Q6NT52 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CGB2Q6NT52 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.77■□□□□ 0.27
CGB2Q6NT52 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CGB2Q6NT52 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CGB2Q6NT52 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CGB2Q6NT52 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CGB2Q6NT52 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CGB2Q6NT52 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CGB2Q6NT52 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CGB2Q6NT52 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CGB2Q6NT52 TUBB8P12-201ENST00000308911 1335 ntBASIC16.76■□□□□ 0.27
CGB2Q6NT52 TUBB7P-202ENST00000428444 1305 ntBASIC16.76■□□□□ 0.27
CGB2Q6NT52 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.76■□□□□ 0.27
CGB2Q6NT52 TUBB8P7-204ENST00000567960 1332 ntBASIC16.76■□□□□ 0.27
CGB2Q6NT52 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.76■□□□□ 0.27
CGB2Q6NT52 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CGB2Q6NT52 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CGB2Q6NT52 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CGB2Q6NT52 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
CGB2Q6NT52 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms