Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 AC243591.1-201ENST00000452967 1364 ntBASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 IGHV3-22-201ENST00000520721 359 ntBASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 AC008667.4-201ENST00000607370 168 ntBASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 AF228730.7-201ENST00000641842 219 ntBASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 FRMD8P1-201ENST00000440433 1524 ntBASIC19.46■□□□□ 0.71
PPP4R3AQ6IN85 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 AC092910.1-201ENST00000482027 1129 ntBASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 IGHV3-65-201ENST00000523210 341 ntBASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 AC117500.6-201ENST00000624871 588 ntBASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PPP4R3AQ6IN85 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 AC005593.1-201ENST00000624894 515 ntBASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PPP4R3AQ6IN85 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 AC092053.1-201ENST00000605787 1936 ntBASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 AC098831.1-202ENST00000438821 336 ntBASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
PPP4R3AQ6IN85 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms