Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC13.67□□□□□ -0.22
FAM78BQ5VT40 FAM87A-204ENST00000613235 858 ntBASIC13.67□□□□□ -0.22
FAM78BQ5VT40 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.67□□□□□ -0.22
FAM78BQ5VT40 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
FAM78BQ5VT40 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.67□□□□□ -0.22
FAM78BQ5VT40 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.67□□□□□ -0.22
FAM78BQ5VT40 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.67□□□□□ -0.22
FAM78BQ5VT40 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FAM78BQ5VT40 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
FAM78BQ5VT40 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
FAM78BQ5VT40 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
FAM78BQ5VT40 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FAM78BQ5VT40 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
FAM78BQ5VT40 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.67□□□□□ -0.22
FAM78BQ5VT40 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
FAM78BQ5VT40 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 KRT18P22-201ENST00000402024 1347 ntBASIC13.66□□□□□ -0.22
FAM78BQ5VT40 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 AL136379.1-201ENST00000623471 2642 ntBASIC13.66□□□□□ -0.22
FAM78BQ5VT40 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 AC023824.1-201ENST00000562945 2975 ntBASIC13.66□□□□□ -0.22
FAM78BQ5VT40 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 AC005104.2-201ENST00000427818 678 ntBASIC13.66□□□□□ -0.22
FAM78BQ5VT40 AC009947.2-201ENST00000444014 672 ntBASIC13.66□□□□□ -0.22
FAM78BQ5VT40 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.66□□□□□ -0.22
FAM78BQ5VT40 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.65□□□□□ -0.22
FAM78BQ5VT40 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.65□□□□□ -0.22
FAM78BQ5VT40 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
FAM78BQ5VT40 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
FAM78BQ5VT40 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.65□□□□□ -0.22
FAM78BQ5VT40 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FAM78BQ5VT40 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
FAM78BQ5VT40 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
FAM78BQ5VT40 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.65□□□□□ -0.22
FAM78BQ5VT40 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FAM78BQ5VT40 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FAM78BQ5VT40 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FAM78BQ5VT40 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FAM78BQ5VT40 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
FAM78BQ5VT40 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FAM78BQ5VT40 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
FAM78BQ5VT40 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms