Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 HLA-A-202ENST00000376806 1854 ntBASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 CD70-202ENST00000423145 881 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 TSPY15P-201ENST00000457163 923 ntBASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 AP002490.2-201ENST00000524791 560 ntBASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 AL031432.5-201ENST00000641059 760 ntBASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 LINC01568-207ENST00000641790 1380 ntBASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 FRMD8P1-201ENST00000440433 1524 ntBASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 SPDYE15P-201ENST00000424157 909 ntBASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 AC007967.3-201ENST00000434308 558 ntBASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 AC111152.3-201ENST00000569699 673 ntBASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 KRT18P22-201ENST00000402024 1347 ntBASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 AC132872.4-202ENST00000622924 2756 ntBASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
LINC00242Q5T6M2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms