Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01559Q495D7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
LINC01559Q495D7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01559Q495D7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01559Q495D7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01559Q495D7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01559Q495D7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01559Q495D7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01559Q495D7 INGX-201ENST00000359239 846 ntBASIC12.91□□□□□ -0.34
LINC01559Q495D7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01559Q495D7 HMGA1P5-201ENST00000412453 271 ntBASIC12.91□□□□□ -0.34
LINC01559Q495D7 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01559Q495D7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01559Q495D7 EAF2-202ENST00000451944 960 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01559Q495D7 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01559Q495D7 AC018635.1-201ENST00000468292 1030 ntBASIC12.91□□□□□ -0.34
LINC01559Q495D7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01559Q495D7 TMEM92-AS1-201ENST00000508851 750 ntTSL 3 BASIC12.91□□□□□ -0.34
LINC01559Q495D7 AP003168.1-201ENST00000530091 307 ntBASIC12.91□□□□□ -0.34
LINC01559Q495D7 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC12.91□□□□□ -0.34
LINC01559Q495D7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01559Q495D7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01559Q495D7 Z99916.2-201ENST00000604037 246 ntBASIC12.91□□□□□ -0.34
LINC01559Q495D7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01559Q495D7 AC023510.2-201ENST00000622162 746 ntBASIC12.91□□□□□ -0.34
LINC01559Q495D7 AC080188.3-201ENST00000624842 748 ntBASIC12.91□□□□□ -0.34
LINC01559Q495D7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01559Q495D7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01559Q495D7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01559Q495D7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01559Q495D7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01559Q495D7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01559Q495D7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01559Q495D7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01559Q495D7 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01559Q495D7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01559Q495D7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01559Q495D7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01559Q495D7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
LINC01559Q495D7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01559Q495D7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01559Q495D7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01559Q495D7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
LINC01559Q495D7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01559Q495D7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01559Q495D7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 BX005214.2-201ENST00000423499 1077 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 MTND3P3-201ENST00000505004 126 ntBASIC12.9□□□□□ -0.34
LINC01559Q495D7 AC093835.1-201ENST00000508072 568 ntTSL 4 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 AC129507.2-201ENST00000572499 748 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 AC004263.2-201ENST00000617183 678 ntBASIC12.9□□□□□ -0.34
LINC01559Q495D7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 AC022079.1-201ENST00000621546 602 ntBASIC12.9□□□□□ -0.34
LINC01559Q495D7 AL138960.2-201ENST00000625145 535 ntBASIC12.9□□□□□ -0.34
LINC01559Q495D7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01559Q495D7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC01559Q495D7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms