Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-BQ31612 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HLA-BQ31612 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
HLA-BQ31612 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HLA-BQ31612 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-BQ31612 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HLA-BQ31612 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-BQ31612 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-BQ31612 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
HLA-BQ31612 AC092580.3-201ENST00000430932 139 ntBASIC16.51■□□□□ 0.23
HLA-BQ31612 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-BQ31612 MIR4453-201ENST00000584019 89 ntBASIC16.51■□□□□ 0.23
HLA-BQ31612 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-BQ31612 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-BQ31612 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-BQ31612 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
HLA-BQ31612 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-BQ31612 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-BQ31612 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-BQ31612 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-BQ31612 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-BQ31612 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-BQ31612 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-BQ31612 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-BQ31612 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-BQ31612 AC009113.1-201ENST00000570267 2443 ntBASIC16.5■□□□□ 0.23
HLA-BQ31612 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HLA-BQ31612 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-BQ31612 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-BQ31612 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-BQ31612 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-BQ31612 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-BQ31612 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-BQ31612 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.5■□□□□ 0.23
HLA-BQ31612 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.5■□□□□ 0.23
HLA-BQ31612 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-BQ31612 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
HLA-BQ31612 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
HLA-BQ31612 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-BQ31612 AP005018.1-201ENST00000525475 301 ntBASIC16.5■□□□□ 0.23
HLA-BQ31612 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-BQ31612 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HLA-BQ31612 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HLA-BQ31612 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HLA-BQ31612 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-BQ31612 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.5■□□□□ 0.23
HLA-BQ31612 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.5■□□□□ 0.23
HLA-BQ31612 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-BQ31612 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-BQ31612 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-BQ31612 ABALON-201ENST00000629058 1903 ntBASIC16.5■□□□□ 0.23
HLA-BQ31612 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-BQ31612 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-BQ31612 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-BQ31612 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-BQ31612 SLC22A20-204ENST00000530038 1673 ntBASIC16.5■□□□□ 0.23
HLA-BQ31612 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-BQ31612 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-BQ31612 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-BQ31612 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
HLA-BQ31612 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-BQ31612 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HLA-BQ31612 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-BQ31612 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
HLA-BQ31612 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-BQ31612 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-BQ31612 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-BQ31612 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-BQ31612 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HLA-BQ31612 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.49■□□□□ 0.23
HLA-BQ31612 AC241585.1-201ENST00000433527 519 ntBASIC16.49■□□□□ 0.23
HLA-BQ31612 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.49■□□□□ 0.23
HLA-BQ31612 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-BQ31612 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-BQ31612 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-BQ31612 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-BQ31612 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-BQ31612 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-BQ31612 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-BQ31612 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-BQ31612 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-BQ31612 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-BQ31612 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-BQ31612 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-BQ31612 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-BQ31612 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HLA-BQ31612 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-BQ31612 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.48■□□□□ 0.23
HLA-BQ31612 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-BQ31612 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HLA-BQ31612 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-BQ31612 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-BQ31612 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-BQ31612 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.48■□□□□ 0.23
HLA-BQ31612 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-BQ31612 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-BQ31612 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.48■□□□□ 0.23
HLA-BQ31612 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.48■□□□□ 0.23
HLA-BQ31612 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.48■□□□□ 0.23
HLA-BQ31612 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms