Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO1Q2MKA7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 AC073621.1-201ENST00000392730 636 ntBASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 KRT18P27-201ENST00000427733 1299 ntBASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 RNPS1P1-201ENST00000507437 918 ntBASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 AL603756.1-201ENST00000606511 2163 ntBASIC14.8□□□□□ -0.04
RSPO1Q2MKA7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 UBALD1-205ENST00000590891 2641 ntBASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 RPS2P1-201ENST00000434010 821 ntBASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 AL121912.1-201ENST00000603683 238 ntBASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO1Q2MKA7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.78□□□□□ -0.04
RSPO1Q2MKA7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms