Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
SREBF2Q12772 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.41■□□□□ 0.7
SREBF2Q12772 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SREBF2Q12772 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.41■□□□□ 0.7
SREBF2Q12772 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.41■□□□□ 0.7
SREBF2Q12772 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.41■□□□□ 0.7
SREBF2Q12772 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SREBF2Q12772 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.41■□□□□ 0.7
SREBF2Q12772 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.41■□□□□ 0.7
SREBF2Q12772 AC008494.3-201ENST00000606615 944 ntBASIC19.41■□□□□ 0.7
SREBF2Q12772 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.41■□□□□ 0.7
SREBF2Q12772 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.41■□□□□ 0.7
SREBF2Q12772 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SREBF2Q12772 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SREBF2Q12772 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.41■□□□□ 0.7
SREBF2Q12772 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SREBF2Q12772 FLJ13224-201ENST00000313737 1514 ntBASIC19.41■□□□□ 0.7
SREBF2Q12772 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SREBF2Q12772 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SREBF2Q12772 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SREBF2Q12772 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.4■□□□□ 0.7
SREBF2Q12772 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SREBF2Q12772 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SREBF2Q12772 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SREBF2Q12772 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.4■□□□□ 0.7
SREBF2Q12772 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SREBF2Q12772 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SREBF2Q12772 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SREBF2Q12772 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SREBF2Q12772 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SREBF2Q12772 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SREBF2Q12772 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.4■□□□□ 0.7
SREBF2Q12772 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.4■□□□□ 0.7
SREBF2Q12772 ZNF890P-202ENST00000530367 1156 ntBASIC19.4■□□□□ 0.7
SREBF2Q12772 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.4■□□□□ 0.7
SREBF2Q12772 RN7SL828P-201ENST00000607615 303 ntBASIC19.4■□□□□ 0.7
SREBF2Q12772 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.4■□□□□ 0.7
SREBF2Q12772 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.4■□□□□ 0.7
SREBF2Q12772 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SREBF2Q12772 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SREBF2Q12772 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.4■□□□□ 0.7
SREBF2Q12772 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SREBF2Q12772 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.4■□□□□ 0.7
SREBF2Q12772 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SREBF2Q12772 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.39■□□□□ 0.7
SREBF2Q12772 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SREBF2Q12772 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SREBF2Q12772 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SREBF2Q12772 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SREBF2Q12772 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SREBF2Q12772 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SREBF2Q12772 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SREBF2Q12772 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SREBF2Q12772 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SREBF2Q12772 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SREBF2Q12772 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SREBF2Q12772 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.39■□□□□ 0.69
SREBF2Q12772 RPL28-204ENST00000431533 590 ntTSL 2 BASIC19.39■□□□□ 0.69
SREBF2Q12772 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SREBF2Q12772 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SREBF2Q12772 RPL28-206ENST00000558752 671 ntTSL 3 BASIC19.39■□□□□ 0.69
SREBF2Q12772 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.39■□□□□ 0.69
SREBF2Q12772 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SREBF2Q12772 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.39■□□□□ 0.69
SREBF2Q12772 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SREBF2Q12772 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.39■□□□□ 0.69
SREBF2Q12772 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SREBF2Q12772 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SREBF2Q12772 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SREBF2Q12772 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SREBF2Q12772 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SREBF2Q12772 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.39■□□□□ 0.69
SREBF2Q12772 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SREBF2Q12772 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SREBF2Q12772 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SREBF2Q12772 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.38■□□□□ 0.69
SREBF2Q12772 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SREBF2Q12772 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SREBF2Q12772 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SREBF2Q12772 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.38■□□□□ 0.69
SREBF2Q12772 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.38■□□□□ 0.69
SREBF2Q12772 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.38■□□□□ 0.69
SREBF2Q12772 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SREBF2Q12772 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.38■□□□□ 0.69
SREBF2Q12772 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.38■□□□□ 0.69
SREBF2Q12772 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SREBF2Q12772 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.38■□□□□ 0.69
SREBF2Q12772 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.38■□□□□ 0.69
SREBF2Q12772 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.38■□□□□ 0.69
SREBF2Q12772 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.38■□□□□ 0.69
SREBF2Q12772 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SREBF2Q12772 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.38■□□□□ 0.69
SREBF2Q12772 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SREBF2Q12772 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.38■□□□□ 0.69
SREBF2Q12772 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.38■□□□□ 0.69
SREBF2Q12772 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SREBF2Q12772 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SREBF2Q12772 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SREBF2Q12772 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SREBF2Q12772 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms