Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL1Q00532 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CDKL1Q00532 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CDKL1Q00532 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.89■□□□□ 0.29
CDKL1Q00532 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDKL1Q00532 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL1Q00532 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL1Q00532 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.89■□□□□ 0.29
CDKL1Q00532 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.89■□□□□ 0.29
CDKL1Q00532 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CDKL1Q00532 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL1Q00532 NUS1P2-201ENST00000417358 873 ntBASIC16.89■□□□□ 0.29
CDKL1Q00532 NUS1P1-201ENST00000446295 882 ntBASIC16.89■□□□□ 0.29
CDKL1Q00532 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.89■□□□□ 0.29
CDKL1Q00532 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL1Q00532 AC124947.2-201ENST00000547118 1133 ntBASIC16.89■□□□□ 0.29
CDKL1Q00532 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.89■□□□□ 0.29
CDKL1Q00532 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.89■□□□□ 0.29
CDKL1Q00532 AL591684.3-201ENST00000605187 298 ntBASIC16.89■□□□□ 0.29
CDKL1Q00532 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL1Q00532 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL1Q00532 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL1Q00532 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL1Q00532 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.89■□□□□ 0.29
CDKL1Q00532 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL1Q00532 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDKL1Q00532 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL1Q00532 EGFEM1P-202ENST00000431685 1563 ntBASIC16.89■□□□□ 0.29
CDKL1Q00532 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL1Q00532 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL1Q00532 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL1Q00532 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CDKL1Q00532 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL1Q00532 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL1Q00532 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL1Q00532 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL1Q00532 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.88■□□□□ 0.29
CDKL1Q00532 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CDKL1Q00532 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDKL1Q00532 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDKL1Q00532 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDKL1Q00532 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKL1Q00532 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDKL1Q00532 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKL1Q00532 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
CDKL1Q00532 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CDKL1Q00532 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CDKL1Q00532 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.88■□□□□ 0.29
CDKL1Q00532 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CDKL1Q00532 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.88■□□□□ 0.29
CDKL1Q00532 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDKL1Q00532 SIGLEC30P-201ENST00000455569 941 ntBASIC16.88■□□□□ 0.29
CDKL1Q00532 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.88■□□□□ 0.29
CDKL1Q00532 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.88■□□□□ 0.29
CDKL1Q00532 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKL1Q00532 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKL1Q00532 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.88■□□□□ 0.29
CDKL1Q00532 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDKL1Q00532 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
CDKL1Q00532 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CDKL1Q00532 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKL1Q00532 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKL1Q00532 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDKL1Q00532 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL1Q00532 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKL1Q00532 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDKL1Q00532 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.87■□□□□ 0.29
CDKL1Q00532 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDKL1Q00532 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL1Q00532 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
CDKL1Q00532 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL1Q00532 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDKL1Q00532 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.87■□□□□ 0.29
CDKL1Q00532 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL1Q00532 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL1Q00532 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.87■□□□□ 0.29
CDKL1Q00532 ACTG1P4-201ENST00000425123 1122 ntBASIC16.87■□□□□ 0.29
CDKL1Q00532 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms