Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CBX1P83916 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.93■□□□□ 0.46
CBX1P83916 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CBX1P83916 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.93■□□□□ 0.46
CBX1P83916 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.93■□□□□ 0.46
CBX1P83916 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.93■□□□□ 0.46
CBX1P83916 AL139246.5-201ENST00000606645 996 ntBASIC17.93■□□□□ 0.46
CBX1P83916 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CBX1P83916 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CBX1P83916 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CBX1P83916 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CBX1P83916 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.93■□□□□ 0.46
CBX1P83916 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CBX1P83916 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CBX1P83916 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CBX1P83916 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.93■□□□□ 0.46
CBX1P83916 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.93■□□□□ 0.46
CBX1P83916 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CBX1P83916 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CBX1P83916 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CBX1P83916 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CBX1P83916 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CBX1P83916 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CBX1P83916 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.92■□□□□ 0.46
CBX1P83916 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CBX1P83916 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CBX1P83916 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CBX1P83916 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CBX1P83916 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CBX1P83916 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.92■□□□□ 0.46
CBX1P83916 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CBX1P83916 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CBX1P83916 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CBX1P83916 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
CBX1P83916 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CBX1P83916 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.92■□□□□ 0.46
CBX1P83916 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CBX1P83916 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CBX1P83916 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.92■□□□□ 0.46
CBX1P83916 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CBX1P83916 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CBX1P83916 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CBX1P83916 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.92■□□□□ 0.46
CBX1P83916 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CBX1P83916 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CBX1P83916 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CBX1P83916 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CBX1P83916 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.92■□□□□ 0.46
CBX1P83916 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CBX1P83916 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CBX1P83916 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CBX1P83916 AP005117.1-202ENST00000581724 1908 ntBASIC17.92■□□□□ 0.46
CBX1P83916 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CBX1P83916 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CBX1P83916 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.91■□□□□ 0.46
CBX1P83916 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX1P83916 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CBX1P83916 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.91■□□□□ 0.46
CBX1P83916 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.91■□□□□ 0.46
CBX1P83916 AC007292.2-201ENST00000593524 1812 ntBASIC17.91■□□□□ 0.46
CBX1P83916 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX1P83916 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
CBX1P83916 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CBX1P83916 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CBX1P83916 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX1P83916 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CBX1P83916 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CBX1P83916 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.91■□□□□ 0.46
CBX1P83916 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.91■□□□□ 0.46
CBX1P83916 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CBX1P83916 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
CBX1P83916 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX1P83916 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX1P83916 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.91■□□□□ 0.46
CBX1P83916 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX1P83916 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.91■□□□□ 0.46
CBX1P83916 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX1P83916 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CBX1P83916 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CBX1P83916 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CBX1P83916 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.91■□□□□ 0.46
CBX1P83916 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CBX1P83916 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX1P83916 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX1P83916 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX1P83916 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CBX1P83916 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CBX1P83916 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX1P83916 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.9■□□□□ 0.46
CBX1P83916 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX1P83916 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX1P83916 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX1P83916 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX1P83916 KRT8P11-201ENST00000409686 1436 ntBASIC17.9■□□□□ 0.46
CBX1P83916 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.9■□□□□ 0.46
CBX1P83916 AC132938.6-201ENST00000623828 1655 ntBASIC17.9■□□□□ 0.46
CBX1P83916 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX1P83916 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.9■□□□□ 0.46
CBX1P83916 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CBX1P83916 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms