Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.86■□□□□ 0.61
PEX3P56589 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PEX3P56589 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PEX3P56589 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.86■□□□□ 0.61
PEX3P56589 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PEX3P56589 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PEX3P56589 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.86■□□□□ 0.61
PEX3P56589 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PEX3P56589 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PEX3P56589 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PEX3P56589 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.85■□□□□ 0.61
PEX3P56589 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PEX3P56589 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PEX3P56589 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PEX3P56589 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.85■□□□□ 0.61
PEX3P56589 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.85■□□□□ 0.61
PEX3P56589 AP001094.4-201ENST00000579008 2176 ntBASIC18.85■□□□□ 0.61
PEX3P56589 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PEX3P56589 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PEX3P56589 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PEX3P56589 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PEX3P56589 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PEX3P56589 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.85■□□□□ 0.61
PEX3P56589 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PEX3P56589 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.85■□□□□ 0.61
PEX3P56589 SLC25A6P2-201ENST00000497974 877 ntBASIC18.85■□□□□ 0.61
PEX3P56589 OR7E47P-204ENST00000575924 449 ntBASIC18.85■□□□□ 0.61
PEX3P56589 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.85■□□□□ 0.61
PEX3P56589 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
PEX3P56589 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PEX3P56589 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PEX3P56589 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PEX3P56589 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PEX3P56589 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PEX3P56589 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.85■□□□□ 0.61
PEX3P56589 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PEX3P56589 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PEX3P56589 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PEX3P56589 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PEX3P56589 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PEX3P56589 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PEX3P56589 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PEX3P56589 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PEX3P56589 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PEX3P56589 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PEX3P56589 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PEX3P56589 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PEX3P56589 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PEX3P56589 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PEX3P56589 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.84■□□□□ 0.61
PEX3P56589 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
PEX3P56589 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PEX3P56589 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PEX3P56589 MIR574-201ENST00000385209 96 ntBASIC18.84■□□□□ 0.61
PEX3P56589 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.84■□□□□ 0.61
PEX3P56589 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
PEX3P56589 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.84■□□□□ 0.61
PEX3P56589 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.84■□□□□ 0.61
PEX3P56589 AC007967.2-201ENST00000432613 625 ntBASIC18.84■□□□□ 0.61
PEX3P56589 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PEX3P56589 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PEX3P56589 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.84■□□□□ 0.61
PEX3P56589 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.84■□□□□ 0.61
PEX3P56589 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.84■□□□□ 0.61
PEX3P56589 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PEX3P56589 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.84■□□□□ 0.61
PEX3P56589 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.84■□□□□ 0.61
PEX3P56589 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PEX3P56589 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PEX3P56589 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PEX3P56589 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PEX3P56589 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PEX3P56589 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PEX3P56589 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PEX3P56589 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PEX3P56589 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PEX3P56589 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.83■□□□□ 0.61
PEX3P56589 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PEX3P56589 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PEX3P56589 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.83■□□□□ 0.61
PEX3P56589 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.83■□□□□ 0.61
PEX3P56589 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PEX3P56589 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PEX3P56589 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
PEX3P56589 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PEX3P56589 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
PEX3P56589 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.83■□□□□ 0.6
PEX3P56589 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PEX3P56589 CRYGEP-201ENST00000412192 528 ntBASIC18.83■□□□□ 0.6
PEX3P56589 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.83■□□□□ 0.6
PEX3P56589 PRSS29P-201ENST00000440800 595 ntBASIC18.83■□□□□ 0.6
PEX3P56589 VN2R19P-201ENST00000442399 1052 ntBASIC18.83■□□□□ 0.6
PEX3P56589 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.83■□□□□ 0.6
PEX3P56589 AL671883.3-201ENST00000603274 991 ntBASIC18.83■□□□□ 0.6
PEX3P56589 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.83■□□□□ 0.6
PEX3P56589 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PEX3P56589 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PEX3P56589 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.83■□□□□ 0.6
PEX3P56589 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
PEX3P56589 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms