Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH12P55289 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH12P55289 AL139384.1-201ENST00000612143 3047 ntBASIC16.01■□□□□ 0.15
CDH12P55289 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH12P55289 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH12P55289 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH12P55289 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH12P55289 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH12P55289 AL845331.1-201ENST00000424978 1190 ntBASIC16.01■□□□□ 0.15
CDH12P55289 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH12P55289 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH12P55289 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH12P55289 IGHV3-52-201ENST00000519770 353 ntBASIC16.01■□□□□ 0.15
CDH12P55289 AC090616.6-201ENST00000582640 721 ntBASIC16.01■□□□□ 0.15
CDH12P55289 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH12P55289 AL353801.3-201ENST00000609898 542 ntBASIC16.01■□□□□ 0.15
CDH12P55289 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH12P55289 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH12P55289 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
CDH12P55289 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH12P55289 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.01■□□□□ 0.15
CDH12P55289 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH12P55289 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH12P55289 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH12P55289 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH12P55289 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CDH12P55289 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH12P55289 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH12P55289 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDH12P55289 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDH12P55289 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CDH12P55289 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16■□□□□ 0.15
CDH12P55289 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CDH12P55289 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CDH12P55289 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CDH12P55289 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDH12P55289 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16■□□□□ 0.15
CDH12P55289 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16■□□□□ 0.15
CDH12P55289 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16■□□□□ 0.15
CDH12P55289 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH12P55289 CICP6-201ENST00000457191 2729 ntBASIC16■□□□□ 0.15
CDH12P55289 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH12P55289 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH12P55289 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH12P55289 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16■□□□□ 0.15
CDH12P55289 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
CDH12P55289 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH12P55289 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CDH12P55289 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CDH12P55289 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16■□□□□ 0.15
CDH12P55289 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH12P55289 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
CDH12P55289 AC109462.3-201ENST00000573934 613 ntBASIC16■□□□□ 0.15
CDH12P55289 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16■□□□□ 0.15
CDH12P55289 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16■□□□□ 0.15
CDH12P55289 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
CDH12P55289 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH12P55289 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16■□□□□ 0.15
CDH12P55289 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16■□□□□ 0.15
CDH12P55289 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CDH12P55289 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CDH12P55289 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16■□□□□ 0.15
CDH12P55289 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CDH12P55289 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH12P55289 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH12P55289 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16■□□□□ 0.15
CDH12P55289 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16■□□□□ 0.15
CDH12P55289 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH12P55289 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH12P55289 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH12P55289 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH12P55289 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH12P55289 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CDH12P55289 AL031133.1-201ENST00000406807 723 ntBASIC15.99■□□□□ 0.15
CDH12P55289 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.99■□□□□ 0.15
CDH12P55289 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH12P55289 KRT18P21-201ENST00000515767 1272 ntBASIC15.99■□□□□ 0.15
CDH12P55289 KRT8P26-201ENST00000534154 1276 ntBASIC15.99■□□□□ 0.15
CDH12P55289 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH12P55289 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.99■□□□□ 0.15
CDH12P55289 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.99■□□□□ 0.15
CDH12P55289 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.99■□□□□ 0.15
CDH12P55289 AC011840.4-201ENST00000578471 627 ntBASIC15.99■□□□□ 0.15
CDH12P55289 AC005336.2-201ENST00000593183 939 ntBASIC15.99■□□□□ 0.15
CDH12P55289 AL138831.2-201ENST00000606564 490 ntBASIC15.99■□□□□ 0.15
CDH12P55289 AC019129.2-201ENST00000609837 1235 ntBASIC15.99■□□□□ 0.15
CDH12P55289 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH12P55289 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH12P55289 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH12P55289 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH12P55289 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH12P55289 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CDH12P55289 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH12P55289 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH12P55289 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH12P55289 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH12P55289 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms