Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.71■□□□□ 0.59
NCKAP1LP55160 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
NCKAP1LP55160 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NCKAP1LP55160 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCKAP1LP55160 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCKAP1LP55160 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.7■□□□□ 0.58
NCKAP1LP55160 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCKAP1LP55160 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.7■□□□□ 0.58
NCKAP1LP55160 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCKAP1LP55160 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCKAP1LP55160 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCKAP1LP55160 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCKAP1LP55160 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NCKAP1LP55160 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NCKAP1LP55160 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
NCKAP1LP55160 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NCKAP1LP55160 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
NCKAP1LP55160 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.7■□□□□ 0.58
NCKAP1LP55160 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.7■□□□□ 0.58
NCKAP1LP55160 KRT8P49-201ENST00000604166 1432 ntBASIC18.7■□□□□ 0.58
NCKAP1LP55160 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.7■□□□□ 0.58
NCKAP1LP55160 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCKAP1LP55160 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCKAP1LP55160 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.7■□□□□ 0.58
NCKAP1LP55160 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCKAP1LP55160 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.7■□□□□ 0.58
NCKAP1LP55160 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NCKAP1LP55160 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NCKAP1LP55160 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCKAP1LP55160 AC129492.6-201ENST00000611383 1305 ntBASIC18.7■□□□□ 0.58
NCKAP1LP55160 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NCKAP1LP55160 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCKAP1LP55160 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCKAP1LP55160 TOP3BP1-201ENST00000420768 1380 ntBASIC18.69■□□□□ 0.58
NCKAP1LP55160 AL021920.2-201ENST00000624828 1351 ntBASIC18.69■□□□□ 0.58
NCKAP1LP55160 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCKAP1LP55160 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCKAP1LP55160 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.69■□□□□ 0.58
NCKAP1LP55160 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.69■□□□□ 0.58
NCKAP1LP55160 AC080080.1-201ENST00000625121 2420 ntBASIC18.69■□□□□ 0.58
NCKAP1LP55160 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.69■□□□□ 0.58
NCKAP1LP55160 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NCKAP1LP55160 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
NCKAP1LP55160 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCKAP1LP55160 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NCKAP1LP55160 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NCKAP1LP55160 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.69■□□□□ 0.58
NCKAP1LP55160 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.69■□□□□ 0.58
NCKAP1LP55160 AL671883.3-201ENST00000603274 991 ntBASIC18.69■□□□□ 0.58
NCKAP1LP55160 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.69■□□□□ 0.58
NCKAP1LP55160 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NCKAP1LP55160 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCKAP1LP55160 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.69■□□□□ 0.58
NCKAP1LP55160 TUBB8P12-201ENST00000308911 1335 ntBASIC18.69■□□□□ 0.58
NCKAP1LP55160 TUBB7P-202ENST00000428444 1305 ntBASIC18.69■□□□□ 0.58
NCKAP1LP55160 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NCKAP1LP55160 TUBB8P7-204ENST00000567960 1332 ntBASIC18.69■□□□□ 0.58
NCKAP1LP55160 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NCKAP1LP55160 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCKAP1LP55160 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NCKAP1LP55160 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.69■□□□□ 0.58
NCKAP1LP55160 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.68■□□□□ 0.58
NCKAP1LP55160 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NCKAP1LP55160 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.68■□□□□ 0.58
NCKAP1LP55160 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.68■□□□□ 0.58
NCKAP1LP55160 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCKAP1LP55160 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCKAP1LP55160 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NCKAP1LP55160 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCKAP1LP55160 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NCKAP1LP55160 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NCKAP1LP55160 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCKAP1LP55160 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCKAP1LP55160 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCKAP1LP55160 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NCKAP1LP55160 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NCKAP1LP55160 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCKAP1LP55160 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NCKAP1LP55160 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.68■□□□□ 0.58
NCKAP1LP55160 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NCKAP1LP55160 AC140113.2-201ENST00000604370 208 ntBASIC18.68■□□□□ 0.58
NCKAP1LP55160 AC064836.3-201ENST00000607928 673 ntBASIC18.68■□□□□ 0.58
NCKAP1LP55160 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.68■□□□□ 0.58
NCKAP1LP55160 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
NCKAP1LP55160 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NCKAP1LP55160 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NCKAP1LP55160 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCKAP1LP55160 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.68■□□□□ 0.58
NCKAP1LP55160 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NCKAP1LP55160 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCKAP1LP55160 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.68■□□□□ 0.58
NCKAP1LP55160 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NCKAP1LP55160 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCKAP1LP55160 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
NCKAP1LP55160 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.67■□□□□ 0.58
NCKAP1LP55160 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NCKAP1LP55160 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCKAP1LP55160 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NCKAP1LP55160 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCKAP1LP55160 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms