Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.65■□□□□ 0.26
PDX1P52945 AP002472.1-201ENST00000577490 586 ntBASIC16.65■□□□□ 0.26
PDX1P52945 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDX1P52945 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDX1P52945 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDX1P52945 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.65■□□□□ 0.26
PDX1P52945 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.65■□□□□ 0.26
PDX1P52945 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.65■□□□□ 0.26
PDX1P52945 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDX1P52945 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDX1P52945 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.65■□□□□ 0.26
PDX1P52945 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDX1P52945 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
PDX1P52945 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.65■□□□□ 0.26
PDX1P52945 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDX1P52945 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDX1P52945 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
PDX1P52945 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PDX1P52945 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PDX1P52945 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDX1P52945 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PDX1P52945 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PDX1P52945 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDX1P52945 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDX1P52945 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDX1P52945 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDX1P52945 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.64■□□□□ 0.25
PDX1P52945 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDX1P52945 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDX1P52945 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.64■□□□□ 0.25
PDX1P52945 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.64■□□□□ 0.25
PDX1P52945 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.64■□□□□ 0.25
PDX1P52945 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.64■□□□□ 0.25
PDX1P52945 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDX1P52945 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.64■□□□□ 0.25
PDX1P52945 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.64■□□□□ 0.25
PDX1P52945 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.64■□□□□ 0.25
PDX1P52945 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PDX1P52945 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDX1P52945 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PDX1P52945 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.64■□□□□ 0.25
PDX1P52945 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDX1P52945 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PDX1P52945 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.64■□□□□ 0.25
PDX1P52945 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PDX1P52945 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDX1P52945 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.63■□□□□ 0.25
PDX1P52945 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDX1P52945 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDX1P52945 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDX1P52945 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDX1P52945 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
PDX1P52945 AC025580.3-201ENST00000617932 1424 ntBASIC16.63■□□□□ 0.25
PDX1P52945 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDX1P52945 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
PDX1P52945 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PDX1P52945 CROCCP1-201ENST00000426910 5675 ntBASIC16.63■□□□□ 0.25
PDX1P52945 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PDX1P52945 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.63■□□□□ 0.25
PDX1P52945 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDX1P52945 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDX1P52945 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.63■□□□□ 0.25
PDX1P52945 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PDX1P52945 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDX1P52945 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDX1P52945 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDX1P52945 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PDX1P52945 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDX1P52945 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.63■□□□□ 0.25
PDX1P52945 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDX1P52945 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.63■□□□□ 0.25
PDX1P52945 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.63■□□□□ 0.25
PDX1P52945 FAM58CP-201ENST00000435741 640 ntBASIC16.63■□□□□ 0.25
PDX1P52945 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.63■□□□□ 0.25
PDX1P52945 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
PDX1P52945 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.63■□□□□ 0.25
PDX1P52945 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.63■□□□□ 0.25
PDX1P52945 GGTLC5P-201ENST00000617623 998 ntBASIC16.63■□□□□ 0.25
PDX1P52945 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDX1P52945 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDX1P52945 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.63■□□□□ 0.25
PDX1P52945 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDX1P52945 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.63■□□□□ 0.25
PDX1P52945 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.63■□□□□ 0.25
PDX1P52945 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDX1P52945 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDX1P52945 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PDX1P52945 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PDX1P52945 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDX1P52945 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDX1P52945 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PDX1P52945 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PDX1P52945 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PDX1P52945 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PDX1P52945 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
PDX1P52945 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.62■□□□□ 0.25
PDX1P52945 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDX1P52945 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDX1P52945 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.62■□□□□ 0.25
PDX1P52945 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms