Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.3■□□□□ 0.68
USP11P51784 AC007967.2-201ENST00000432613 625 ntBASIC19.3■□□□□ 0.68
USP11P51784 RHOQP3-201ENST00000437982 621 ntBASIC19.3■□□□□ 0.68
USP11P51784 KRT18P2-201ENST00000447938 1258 ntBASIC19.3■□□□□ 0.68
USP11P51784 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.3■□□□□ 0.68
USP11P51784 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
USP11P51784 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.3■□□□□ 0.68
USP11P51784 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.3■□□□□ 0.68
USP11P51784 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.3■□□□□ 0.68
USP11P51784 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
USP11P51784 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.3■□□□□ 0.68
USP11P51784 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP11P51784 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP11P51784 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP11P51784 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.3■□□□□ 0.68
USP11P51784 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP11P51784 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
USP11P51784 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.3■□□□□ 0.68
USP11P51784 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP11P51784 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
USP11P51784 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.3■□□□□ 0.68
USP11P51784 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP11P51784 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP11P51784 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP11P51784 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
USP11P51784 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.29■□□□□ 0.68
USP11P51784 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP11P51784 TUBB8P12-201ENST00000308911 1335 ntBASIC19.29■□□□□ 0.68
USP11P51784 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP11P51784 TUBB7P-202ENST00000428444 1305 ntBASIC19.29■□□□□ 0.68
USP11P51784 TUBB8P7-204ENST00000567960 1332 ntBASIC19.29■□□□□ 0.68
USP11P51784 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP11P51784 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.29■□□□□ 0.68
USP11P51784 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP11P51784 KRT8P49-201ENST00000604166 1432 ntBASIC19.29■□□□□ 0.68
USP11P51784 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP11P51784 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.29■□□□□ 0.68
USP11P51784 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
USP11P51784 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
USP11P51784 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
USP11P51784 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP11P51784 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
USP11P51784 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.29■□□□□ 0.68
USP11P51784 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.29■□□□□ 0.68
USP11P51784 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.29■□□□□ 0.68
USP11P51784 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.29■□□□□ 0.68
USP11P51784 RNA5SP416-201ENST00000516838 111 ntBASIC19.29■□□□□ 0.68
USP11P51784 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP11P51784 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.29■□□□□ 0.68
USP11P51784 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP11P51784 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.29■□□□□ 0.68
USP11P51784 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.29■□□□□ 0.68
USP11P51784 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.29■□□□□ 0.68
USP11P51784 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.29■□□□□ 0.68
USP11P51784 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP11P51784 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.29■□□□□ 0.68
USP11P51784 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP11P51784 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP11P51784 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP11P51784 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP11P51784 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP11P51784 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP11P51784 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP11P51784 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
USP11P51784 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP11P51784 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
USP11P51784 PRORSD1P-202ENST00000563365 2154 ntBASIC19.29■□□□□ 0.68
USP11P51784 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.29■□□□□ 0.68
USP11P51784 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP11P51784 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.28■□□□□ 0.68
USP11P51784 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.28■□□□□ 0.68
USP11P51784 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.28■□□□□ 0.68
USP11P51784 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP11P51784 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
USP11P51784 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
USP11P51784 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP11P51784 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.28■□□□□ 0.68
USP11P51784 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP11P51784 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.28■□□□□ 0.68
USP11P51784 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP11P51784 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP11P51784 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP11P51784 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
USP11P51784 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP11P51784 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP11P51784 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP11P51784 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP11P51784 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP11P51784 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP11P51784 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP11P51784 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.28■□□□□ 0.68
USP11P51784 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
USP11P51784 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.28■□□□□ 0.68
USP11P51784 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.28■□□□□ 0.68
USP11P51784 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP11P51784 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.28■□□□□ 0.68
USP11P51784 ACTL9-202ENST00000612068 1252 ntBASIC19.28■□□□□ 0.68
USP11P51784 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.28■□□□□ 0.68
USP11P51784 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.28■□□□□ 0.68
USP11P51784 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms