Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.59□□□□□ -0.23
CDC34P49427 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDC34P49427 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.59□□□□□ -0.23
CDC34P49427 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDC34P49427 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC34P49427 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC34P49427 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC13.59□□□□□ -0.23
CDC34P49427 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDC34P49427 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.59□□□□□ -0.23
CDC34P49427 AC024243.1-201ENST00000609234 778 ntBASIC13.59□□□□□ -0.23
CDC34P49427 AC092865.7-201ENST00000641832 219 ntBASIC13.59□□□□□ -0.23
CDC34P49427 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC34P49427 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC34P49427 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDC34P49427 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.59□□□□□ -0.23
CDC34P49427 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CDC34P49427 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.59□□□□□ -0.23
CDC34P49427 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CDC34P49427 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CDC34P49427 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC34P49427 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC34P49427 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC34P49427 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC34P49427 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC34P49427 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC34P49427 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CDC34P49427 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
CDC34P49427 MIR600HG-201ENST00000449175 5984 ntBASIC13.58□□□□□ -0.23
CDC34P49427 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CDC34P49427 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CDC34P49427 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CDC34P49427 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.58□□□□□ -0.24
CDC34P49427 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.58□□□□□ -0.24
CDC34P49427 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDC34P49427 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDC34P49427 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC34P49427 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.58□□□□□ -0.24
CDC34P49427 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC34P49427 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CDC34P49427 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC34P49427 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC34P49427 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDC34P49427 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.58□□□□□ -0.24
CDC34P49427 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC34P49427 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDC34P49427 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
CDC34P49427 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC34P49427 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.58□□□□□ -0.24
CDC34P49427 AC002558.1-201ENST00000488906 803 ntBASIC13.58□□□□□ -0.24
CDC34P49427 RPPH1-201ENST00000516869 333 ntBASIC13.58□□□□□ -0.24
CDC34P49427 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.58□□□□□ -0.24
CDC34P49427 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC13.58□□□□□ -0.24
CDC34P49427 MIR3917-201ENST00000580971 93 ntBASIC13.58□□□□□ -0.24
CDC34P49427 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.58□□□□□ -0.24
CDC34P49427 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.58□□□□□ -0.24
CDC34P49427 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CDC34P49427 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDC34P49427 AC092364.2-201ENST00000596710 2692 ntBASIC13.58□□□□□ -0.24
CDC34P49427 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC34P49427 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC34P49427 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CDC34P49427 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC34P49427 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC34P49427 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CDC34P49427 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.58□□□□□ -0.24
CDC34P49427 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC34P49427 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.58□□□□□ -0.24
CDC34P49427 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.57□□□□□ -0.24
CDC34P49427 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CDC34P49427 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.57□□□□□ -0.24
CDC34P49427 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CDC34P49427 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CDC34P49427 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CDC34P49427 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.57□□□□□ -0.24
CDC34P49427 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.57□□□□□ -0.24
CDC34P49427 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.57□□□□□ -0.24
CDC34P49427 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
CDC34P49427 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC13.57□□□□□ -0.24
CDC34P49427 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC13.57□□□□□ -0.24
CDC34P49427 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.57□□□□□ -0.24
CDC34P49427 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CDC34P49427 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC13.57□□□□□ -0.24
CDC34P49427 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.57□□□□□ -0.24
CDC34P49427 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDC34P49427 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms