Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL15A1P39059 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.55■■□□□ 1.04
COL15A1P39059 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.55■■□□□ 1.04
COL15A1P39059 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL15A1P39059 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.55■■□□□ 1.04
COL15A1P39059 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
COL15A1P39059 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.55■■□□□ 1.04
COL15A1P39059 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL15A1P39059 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL15A1P39059 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.55■■□□□ 1.04
COL15A1P39059 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL15A1P39059 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
COL15A1P39059 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL15A1P39059 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.54■■□□□ 1.04
COL15A1P39059 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL15A1P39059 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
COL15A1P39059 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL15A1P39059 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL15A1P39059 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL15A1P39059 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL15A1P39059 AC005034.1-201ENST00000426657 489 ntBASIC21.54■■□□□ 1.04
COL15A1P39059 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL15A1P39059 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL15A1P39059 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL15A1P39059 SLC25A39P2-201ENST00000537614 270 ntBASIC21.54■■□□□ 1.04
COL15A1P39059 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL15A1P39059 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL15A1P39059 MIR6080-201ENST00000617359 66 ntBASIC21.54■■□□□ 1.04
COL15A1P39059 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.54■■□□□ 1.04
COL15A1P39059 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
COL15A1P39059 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC21.54■■□□□ 1.04
COL15A1P39059 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL15A1P39059 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL15A1P39059 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL15A1P39059 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.54■■□□□ 1.04
COL15A1P39059 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
COL15A1P39059 WASH6P-202ENST00000359512 1437 ntBASIC21.54■■□□□ 1.04
COL15A1P39059 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL15A1P39059 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL15A1P39059 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL15A1P39059 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.54■■□□□ 1.04
COL15A1P39059 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL15A1P39059 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL15A1P39059 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL15A1P39059 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.54■■□□□ 1.04
COL15A1P39059 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL15A1P39059 AC116353.5-201ENST00000638148 1699 ntBASIC21.54■■□□□ 1.04
COL15A1P39059 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL15A1P39059 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL15A1P39059 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
COL15A1P39059 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
COL15A1P39059 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL15A1P39059 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL15A1P39059 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC21.53■■□□□ 1.04
COL15A1P39059 SPDYE7P-202ENST00000420373 878 ntBASIC21.53■■□□□ 1.04
COL15A1P39059 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21.53■■□□□ 1.04
COL15A1P39059 FAM207CP-201ENST00000443486 507 ntBASIC21.53■■□□□ 1.04
COL15A1P39059 PPP6R2P1-201ENST00000450880 1275 ntBASIC21.53■■□□□ 1.04
COL15A1P39059 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
COL15A1P39059 IGHV3-42-201ENST00000520410 361 ntBASIC21.53■■□□□ 1.04
COL15A1P39059 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC21.53■■□□□ 1.04
COL15A1P39059 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC21.53■■□□□ 1.04
COL15A1P39059 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL15A1P39059 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.53■■□□□ 1.04
COL15A1P39059 AL353732.1-201ENST00000569618 1459 ntBASIC21.53■■□□□ 1.04
COL15A1P39059 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL15A1P39059 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.53■■□□□ 1.04
COL15A1P39059 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.53■■□□□ 1.04
COL15A1P39059 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.53■■□□□ 1.04
COL15A1P39059 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
COL15A1P39059 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL15A1P39059 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
COL15A1P39059 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL15A1P39059 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
COL15A1P39059 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
COL15A1P39059 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL15A1P39059 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL15A1P39059 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL15A1P39059 CD81-202ENST00000381036 880 ntTSL 3 BASIC21.52■■□□□ 1.04
COL15A1P39059 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL15A1P39059 METTL26-204ENST00000397665 558 ntTSL 2 BASIC21.52■■□□□ 1.04
COL15A1P39059 RAC2-204ENST00000406508 893 ntTSL 5 BASIC21.52■■□□□ 1.04
COL15A1P39059 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
COL15A1P39059 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC21.52■■□□□ 1.04
COL15A1P39059 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC21.52■■□□□ 1.04
COL15A1P39059 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
COL15A1P39059 AL031055.1-201ENST00000606362 631 ntBASIC21.52■■□□□ 1.04
COL15A1P39059 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
COL15A1P39059 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.52■■□□□ 1.04
COL15A1P39059 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL15A1P39059 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL15A1P39059 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
COL15A1P39059 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL15A1P39059 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
COL15A1P39059 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
COL15A1P39059 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.52■■□□□ 1.04
COL15A1P39059 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL15A1P39059 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
COL15A1P39059 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL15A1P39059 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms