Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.03■□□□□ 0.32
HMGCLP35914 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.03■□□□□ 0.32
HMGCLP35914 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.03■□□□□ 0.32
HMGCLP35914 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCLP35914 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.03■□□□□ 0.32
HMGCLP35914 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.03■□□□□ 0.32
HMGCLP35914 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HMGCLP35914 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCLP35914 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.03■□□□□ 0.32
HMGCLP35914 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.03■□□□□ 0.32
HMGCLP35914 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCLP35914 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCLP35914 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCLP35914 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HMGCLP35914 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCLP35914 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.03■□□□□ 0.32
HMGCLP35914 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.03■□□□□ 0.32
HMGCLP35914 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HMGCLP35914 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
HMGCLP35914 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.02■□□□□ 0.32
HMGCLP35914 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.32
HMGCLP35914 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGCLP35914 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.02■□□□□ 0.32
HMGCLP35914 TUBB8P12-201ENST00000308911 1335 ntBASIC17.02■□□□□ 0.32
HMGCLP35914 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.02■□□□□ 0.32
HMGCLP35914 TUBB7P-202ENST00000428444 1305 ntBASIC17.02■□□□□ 0.32
HMGCLP35914 TUBB8P7-204ENST00000567960 1332 ntBASIC17.02■□□□□ 0.32
HMGCLP35914 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGCLP35914 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HMGCLP35914 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HMGCLP35914 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGCLP35914 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
HMGCLP35914 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGCLP35914 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HMGCLP35914 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HMGCLP35914 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGCLP35914 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HMGCLP35914 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
HMGCLP35914 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGCLP35914 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HMGCLP35914 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.02■□□□□ 0.32
HMGCLP35914 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGCLP35914 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGCLP35914 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.02■□□□□ 0.32
HMGCLP35914 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.02■□□□□ 0.32
HMGCLP35914 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.02■□□□□ 0.32
HMGCLP35914 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.02■□□□□ 0.32
HMGCLP35914 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.02■□□□□ 0.32
HMGCLP35914 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
HMGCLP35914 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.02■□□□□ 0.32
HMGCLP35914 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.02■□□□□ 0.32
HMGCLP35914 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.02■□□□□ 0.32
HMGCLP35914 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGCLP35914 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMGCLP35914 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HMGCLP35914 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.02■□□□□ 0.31
HMGCLP35914 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMGCLP35914 AC022211.2-201ENST00000585075 2527 ntBASIC17.02■□□□□ 0.31
HMGCLP35914 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMGCLP35914 AC002310.6-201ENST00000624451 1377 ntBASIC17.02■□□□□ 0.31
HMGCLP35914 AL021920.2-201ENST00000624828 1351 ntBASIC17.02■□□□□ 0.31
HMGCLP35914 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMGCLP35914 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HMGCLP35914 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HMGCLP35914 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
HMGCLP35914 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.01■□□□□ 0.31
HMGCLP35914 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.01■□□□□ 0.31
HMGCLP35914 UNC93B6-202ENST00000528242 690 ntBASIC17.01■□□□□ 0.31
HMGCLP35914 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.01■□□□□ 0.31
HMGCLP35914 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HMGCLP35914 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.01■□□□□ 0.31
HMGCLP35914 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.01■□□□□ 0.31
HMGCLP35914 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.01■□□□□ 0.31
HMGCLP35914 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HMGCLP35914 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.01■□□□□ 0.31
HMGCLP35914 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.01■□□□□ 0.31
HMGCLP35914 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HMGCLP35914 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.01■□□□□ 0.31
HMGCLP35914 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.01■□□□□ 0.31
HMGCLP35914 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCLP35914 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms