Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
KRT20P35900 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT20P35900 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT20P35900 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT20P35900 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT20P35900 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT20P35900 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT20P35900 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
KRT20P35900 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT20P35900 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.35■□□□□ 0.21
KRT20P35900 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.35■□□□□ 0.21
KRT20P35900 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.35■□□□□ 0.21
KRT20P35900 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.35■□□□□ 0.21
KRT20P35900 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT20P35900 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT20P35900 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.35■□□□□ 0.21
KRT20P35900 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
KRT20P35900 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT20P35900 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT20P35900 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
KRT20P35900 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.35■□□□□ 0.21
KRT20P35900 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.35■□□□□ 0.21
KRT20P35900 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
KRT20P35900 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT20P35900 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
KRT20P35900 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
KRT20P35900 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT20P35900 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT20P35900 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
KRT20P35900 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT20P35900 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT20P35900 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
KRT20P35900 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.34■□□□□ 0.21
KRT20P35900 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT20P35900 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
KRT20P35900 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
KRT20P35900 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.34■□□□□ 0.21
KRT20P35900 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
KRT20P35900 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT20P35900 POM121L3P-201ENST00000419331 1163 ntBASIC16.34■□□□□ 0.21
KRT20P35900 AC007967.3-201ENST00000434308 558 ntBASIC16.34■□□□□ 0.21
KRT20P35900 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
KRT20P35900 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.34■□□□□ 0.21
KRT20P35900 AC091607.1-201ENST00000490318 1060 ntBASIC16.34■□□□□ 0.21
KRT20P35900 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.34■□□□□ 0.21
KRT20P35900 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
KRT20P35900 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.34■□□□□ 0.21
KRT20P35900 PRELID1P1-202ENST00000567272 903 ntBASIC16.34■□□□□ 0.21
KRT20P35900 AP005901.3-202ENST00000581653 237 ntBASIC16.34■□□□□ 0.21
KRT20P35900 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
KRT20P35900 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
KRT20P35900 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT20P35900 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT20P35900 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT20P35900 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT20P35900 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
KRT20P35900 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
KRT20P35900 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
KRT20P35900 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
KRT20P35900 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT20P35900 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
KRT20P35900 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT20P35900 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT20P35900 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
KRT20P35900 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
KRT20P35900 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT20P35900 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.33■□□□□ 0.21
KRT20P35900 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT20P35900 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
KRT20P35900 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
KRT20P35900 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
KRT20P35900 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT20P35900 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT20P35900 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms