Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.09■□□□□ 0.49
PCK1P35558 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.09■□□□□ 0.49
PCK1P35558 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCK1P35558 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.09■□□□□ 0.49
PCK1P35558 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCK1P35558 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
PCK1P35558 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.08■□□□□ 0.49
PCK1P35558 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCK1P35558 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.08■□□□□ 0.49
PCK1P35558 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PCK1P35558 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
PCK1P35558 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCK1P35558 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCK1P35558 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.08■□□□□ 0.49
PCK1P35558 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCK1P35558 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PCK1P35558 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PCK1P35558 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCK1P35558 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCK1P35558 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCK1P35558 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCK1P35558 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.08■□□□□ 0.48
PCK1P35558 AL020989.1-201ENST00000422979 469 ntBASIC18.08■□□□□ 0.48
PCK1P35558 NUS1P1-201ENST00000446295 882 ntBASIC18.08■□□□□ 0.48
PCK1P35558 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCK1P35558 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.08■□□□□ 0.48
PCK1P35558 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCK1P35558 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PCK1P35558 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.08■□□□□ 0.48
PCK1P35558 AL591684.3-201ENST00000605187 298 ntBASIC18.08■□□□□ 0.48
PCK1P35558 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCK1P35558 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
PCK1P35558 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCK1P35558 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCK1P35558 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.08■□□□□ 0.48
PCK1P35558 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PCK1P35558 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCK1P35558 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
PCK1P35558 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.08■□□□□ 0.48
PCK1P35558 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PCK1P35558 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PCK1P35558 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.08■□□□□ 0.48
PCK1P35558 CICP6-201ENST00000457191 2729 ntBASIC18.07■□□□□ 0.48
PCK1P35558 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCK1P35558 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCK1P35558 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCK1P35558 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCK1P35558 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCK1P35558 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCK1P35558 AC022211.2-201ENST00000585075 2527 ntBASIC18.07■□□□□ 0.48
PCK1P35558 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.07■□□□□ 0.48
PCK1P35558 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCK1P35558 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCK1P35558 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCK1P35558 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.07■□□□□ 0.48
PCK1P35558 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.07■□□□□ 0.48
PCK1P35558 SIGLEC30P-201ENST00000455569 941 ntBASIC18.07■□□□□ 0.48
PCK1P35558 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.07■□□□□ 0.48
PCK1P35558 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
PCK1P35558 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.07■□□□□ 0.48
PCK1P35558 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.07■□□□□ 0.48
PCK1P35558 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.07■□□□□ 0.48
PCK1P35558 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.07■□□□□ 0.48
PCK1P35558 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCK1P35558 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCK1P35558 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCK1P35558 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCK1P35558 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.07■□□□□ 0.48
PCK1P35558 EGFEM1P-202ENST00000431685 1563 ntBASIC18.07■□□□□ 0.48
PCK1P35558 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.07■□□□□ 0.48
PCK1P35558 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.07■□□□□ 0.48
PCK1P35558 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCK1P35558 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.07■□□□□ 0.48
PCK1P35558 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
PCK1P35558 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.07■□□□□ 0.48
PCK1P35558 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCK1P35558 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.07■□□□□ 0.48
PCK1P35558 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCK1P35558 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCK1P35558 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
PCK1P35558 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.06■□□□□ 0.48
PCK1P35558 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCK1P35558 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCK1P35558 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCK1P35558 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCK1P35558 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCK1P35558 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.06■□□□□ 0.48
PCK1P35558 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCK1P35558 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCK1P35558 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCK1P35558 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCK1P35558 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCK1P35558 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms