Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF1P30408 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF1P30408 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC21.05■□□□□ 0.96
TM4SF1P30408 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC21.05■□□□□ 0.96
TM4SF1P30408 AL844908.2-201ENST00000609461 460 ntBASIC21.05■□□□□ 0.96
TM4SF1P30408 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
TM4SF1P30408 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF1P30408 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF1P30408 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC21.05■□□□□ 0.96
TM4SF1P30408 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.05■□□□□ 0.96
TM4SF1P30408 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF1P30408 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF1P30408 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.05■□□□□ 0.96
TM4SF1P30408 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF1P30408 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC21.05■□□□□ 0.96
TM4SF1P30408 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TM4SF1P30408 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC21.05■□□□□ 0.96
TM4SF1P30408 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.05■□□□□ 0.96
TM4SF1P30408 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF1P30408 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF1P30408 AC087499.5-201ENST00000452760 1342 ntBASIC21.04■□□□□ 0.96
TM4SF1P30408 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF1P30408 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
TM4SF1P30408 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF1P30408 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TM4SF1P30408 LINC00895-201ENST00000629028 1637 ntBASIC21.04■□□□□ 0.96
TM4SF1P30408 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF1P30408 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TM4SF1P30408 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF1P30408 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF1P30408 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF1P30408 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF1P30408 KRT17P7-201ENST00000451704 1104 ntBASIC21.04■□□□□ 0.96
TM4SF1P30408 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF1P30408 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC21.04■□□□□ 0.96
TM4SF1P30408 AP001350.2-201ENST00000625104 1094 ntBASIC21.04■□□□□ 0.96
TM4SF1P30408 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TM4SF1P30408 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.04■□□□□ 0.96
TM4SF1P30408 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF1P30408 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TM4SF1P30408 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TM4SF1P30408 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TM4SF1P30408 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.04■□□□□ 0.96
TM4SF1P30408 AL355312.1-201ENST00000407115 2176 ntBASIC21.03■□□□□ 0.96
TM4SF1P30408 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF1P30408 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
TM4SF1P30408 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.03■□□□□ 0.96
TM4SF1P30408 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF1P30408 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF1P30408 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC21.03■□□□□ 0.96
TM4SF1P30408 PTPA-220ENST00000436883 532 ntTSL 4 BASIC21.03■□□□□ 0.96
TM4SF1P30408 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC21.03■□□□□ 0.96
TM4SF1P30408 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC21.03■□□□□ 0.96
TM4SF1P30408 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC21.03■□□□□ 0.96
TM4SF1P30408 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC21.03■□□□□ 0.96
TM4SF1P30408 PRR29-204ENST00000577953 565 ntTSL 4 BASIC21.03■□□□□ 0.96
TM4SF1P30408 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF1P30408 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC21.03■□□□□ 0.96
TM4SF1P30408 TEX28P1-201ENST00000613479 1221 ntBASIC21.03■□□□□ 0.96
TM4SF1P30408 TEX28P2-201ENST00000617764 1221 ntBASIC21.03■□□□□ 0.96
TM4SF1P30408 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.03■□□□□ 0.96
TM4SF1P30408 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TM4SF1P30408 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF1P30408 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TM4SF1P30408 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.03■□□□□ 0.96
TM4SF1P30408 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.03■□□□□ 0.96
TM4SF1P30408 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TM4SF1P30408 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
TM4SF1P30408 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF1P30408 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF1P30408 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
TM4SF1P30408 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TM4SF1P30408 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF1P30408 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF1P30408 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.02■□□□□ 0.96
TM4SF1P30408 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF1P30408 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF1P30408 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF1P30408 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF1P30408 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF1P30408 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
TM4SF1P30408 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF1P30408 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF1P30408 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TM4SF1P30408 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF1P30408 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF1P30408 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF1P30408 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF1P30408 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC21.02■□□□□ 0.96
TM4SF1P30408 AL353779.1-201ENST00000434793 351 ntBASIC21.02■□□□□ 0.96
TM4SF1P30408 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC21.02■□□□□ 0.96
TM4SF1P30408 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC21.02■□□□□ 0.96
TM4SF1P30408 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC21.02■□□□□ 0.96
TM4SF1P30408 AC022494.1-201ENST00000466044 728 ntBASIC21.02■□□□□ 0.96
TM4SF1P30408 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF1P30408 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC21.02■□□□□ 0.96
TM4SF1P30408 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC21.02■□□□□ 0.96
TM4SF1P30408 MIR4492-201ENST00000581627 80 ntBASIC21.02■□□□□ 0.96
TM4SF1P30408 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC21.02■□□□□ 0.96
TM4SF1P30408 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms