Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN3P26045 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN3P26045 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN3P26045 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
PTPN3P26045 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.47■□□□□ 0.39
PTPN3P26045 DUSP5P1-201ENST00000441325 1139 ntBASIC17.47■□□□□ 0.39
PTPN3P26045 SCARNA2-201ENST00000458748 420 ntBASIC17.47■□□□□ 0.39
PTPN3P26045 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN3P26045 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PTPN3P26045 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.47■□□□□ 0.39
PTPN3P26045 DUX4L17-201ENST00000557360 1267 ntBASIC17.47■□□□□ 0.39
PTPN3P26045 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN3P26045 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN3P26045 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN3P26045 AL139424.1-201ENST00000607572 797 ntBASIC17.47■□□□□ 0.39
PTPN3P26045 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.47■□□□□ 0.39
PTPN3P26045 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN3P26045 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PTPN3P26045 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.47■□□□□ 0.39
PTPN3P26045 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
PTPN3P26045 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN3P26045 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN3P26045 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN3P26045 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN3P26045 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN3P26045 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.47■□□□□ 0.39
PTPN3P26045 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN3P26045 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN3P26045 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN3P26045 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN3P26045 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PTPN3P26045 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PTPN3P26045 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN3P26045 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN3P26045 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN3P26045 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN3P26045 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN3P26045 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN3P26045 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PTPN3P26045 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN3P26045 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN3P26045 RNF216P1-203ENST00000404404 2427 ntBASIC17.46■□□□□ 0.39
PTPN3P26045 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.46■□□□□ 0.39
PTPN3P26045 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.46■□□□□ 0.39
PTPN3P26045 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
PTPN3P26045 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.46■□□□□ 0.39
PTPN3P26045 AC021087.4-201ENST00000563761 564 ntBASIC17.46■□□□□ 0.39
PTPN3P26045 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN3P26045 AC025062.2-201ENST00000605477 670 ntBASIC17.46■□□□□ 0.39
PTPN3P26045 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PTPN3P26045 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.46■□□□□ 0.39
PTPN3P26045 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.46■□□□□ 0.39
PTPN3P26045 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PTPN3P26045 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.46■□□□□ 0.38
PTPN3P26045 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
PTPN3P26045 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PTPN3P26045 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
PTPN3P26045 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN3P26045 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN3P26045 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN3P26045 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN3P26045 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PTPN3P26045 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN3P26045 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN3P26045 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
PTPN3P26045 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN3P26045 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN3P26045 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN3P26045 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
PTPN3P26045 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN3P26045 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.45■□□□□ 0.38
PTPN3P26045 AC139887.3-201ENST00000568585 713 ntBASIC17.45■□□□□ 0.38
PTPN3P26045 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.45■□□□□ 0.38
PTPN3P26045 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN3P26045 AC078925.2-201ENST00000624013 1973 ntBASIC17.45■□□□□ 0.38
PTPN3P26045 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN3P26045 FLJ38576-201ENST00000623820 2459 ntBASIC17.45■□□□□ 0.38
PTPN3P26045 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PTPN3P26045 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.45■□□□□ 0.38
PTPN3P26045 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.45■□□□□ 0.38
PTPN3P26045 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.45■□□□□ 0.38
PTPN3P26045 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.45■□□□□ 0.38
PTPN3P26045 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN3P26045 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPN3P26045 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.44■□□□□ 0.38
PTPN3P26045 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN3P26045 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PTPN3P26045 AC084018.2-201ENST00000613093 2607 ntBASIC17.44■□□□□ 0.38
PTPN3P26045 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN3P26045 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PTPN3P26045 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN3P26045 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN3P26045 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN3P26045 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN3P26045 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
PTPN3P26045 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN3P26045 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN3P26045 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN3P26045 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.44■□□□□ 0.38
PTPN3P26045 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms