Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP24386 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.07■□□□□ 0.16
CHMP24386 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CHMP24386 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CHMP24386 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CHMP24386 AC005915.1-201ENST00000624912 2018 ntBASIC16.07■□□□□ 0.16
CHMP24386 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP24386 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP24386 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.07■□□□□ 0.16
CHMP24386 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP24386 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP24386 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CHMP24386 FER1L4-210ENST00000615531 5998 ntBASIC16.06■□□□□ 0.16
CHMP24386 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP24386 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP24386 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP24386 PCDH8P1-201ENST00000428983 2773 ntBASIC16.06■□□□□ 0.16
CHMP24386 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP24386 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP24386 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP24386 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP24386 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CHMP24386 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.06■□□□□ 0.16
CHMP24386 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP24386 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CHMP24386 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP24386 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP24386 INTS4P1-201ENST00000438455 1935 ntBASIC16.06■□□□□ 0.16
CHMP24386 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CHMP24386 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP24386 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CHMP24386 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP24386 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CHMP24386 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.06■□□□□ 0.16
CHMP24386 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.06■□□□□ 0.16
CHMP24386 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP24386 AC026396.1-201ENST00000419388 421 ntBASIC16.06■□□□□ 0.16
CHMP24386 AC005104.2-201ENST00000427818 678 ntBASIC16.06■□□□□ 0.16
CHMP24386 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP24386 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP24386 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP24386 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP24386 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP24386 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.06■□□□□ 0.16
CHMP24386 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP24386 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP24386 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP24386 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP24386 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP24386 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP24386 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.06■□□□□ 0.16
CHMP24386 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP24386 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP24386 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP24386 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP24386 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CHMP24386 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP24386 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHMP24386 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP24386 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP24386 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.05■□□□□ 0.16
CHMP24386 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.05■□□□□ 0.16
CHMP24386 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP24386 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP24386 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP24386 BX276092.7-203ENST00000637198 1536 ntBASIC16.05■□□□□ 0.16
CHMP24386 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP24386 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.05■□□□□ 0.16
CHMP24386 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CHMP24386 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CHMP24386 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CHMP24386 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP24386 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP24386 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP24386 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP24386 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP24386 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.05■□□□□ 0.16
CHMP24386 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP24386 FAM220CP-201ENST00000395253 831 ntBASIC16.05■□□□□ 0.16
CHMP24386 AC007967.3-201ENST00000434308 558 ntBASIC16.05■□□□□ 0.16
CHMP24386 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP24386 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.05■□□□□ 0.16
CHMP24386 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.05■□□□□ 0.16
CHMP24386 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP24386 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.05■□□□□ 0.16
CHMP24386 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP24386 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.05■□□□□ 0.16
CHMP24386 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP24386 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.05■□□□□ 0.16
CHMP24386 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP24386 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP24386 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CHMP24386 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHMP24386 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.04■□□□□ 0.16
CHMP24386 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.04■□□□□ 0.16
CHMP24386 MST1L-201ENST00000442552 2185 ntBASIC16.04■□□□□ 0.16
CHMP24386 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
CHMP24386 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHMP24386 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms