Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 EPHA2-204ENST00000480202 795 ntTSL 517.48■□□□□ 0.393e-7■■■□□ 15.1
RPS3P23396 PRODH2-206ENST00000591694 728 ntTSL 316.95■□□□□ 0.33e-7■■■□□ 15.1
RPS3P23396 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.69■□□□□ 0.269e-8■■■□□ 15.1
RPS3P23396 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.64■□□□□ 0.253e-7■■■□□ 15.1
RPS3P23396 CCNI-205ENST00000507788 595 ntTSL 416.44■□□□□ 0.223e-7■■■□□ 15.1
RPS3P23396 ZFP36L1-206ENST00000557086 727 ntTSL 216.22■□□□□ 0.193e-7■■■□□ 15.1
RPS3P23396 PLCB1-214ENST00000626161 706 ntTSL 516.21■□□□□ 0.193e-7■■■□□ 15.1
RPS3P23396 SUN1-226ENST00000467483 992 ntTSL 216.09■□□□□ 0.173e-7■■■□□ 15.1
RPS3P23396 ZFP36L1-203ENST00000553375 633 ntTSL 215.86■□□□□ 0.133e-7■■■□□ 15.1
RPS3P23396 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.71■□□□□ 0.13e-7■■■□□ 15.1
RPS3P23396 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.093e-7■■■□□ 15.1
RPS3P23396 SUN1-207ENST00000419312 473 ntTSL 415.55■□□□□ 0.083e-7■■■□□ 15.1
RPS3P23396 PTPRS-207ENST00000589851 1270 ntTSL 515.47■□□□□ 0.073e-7■■■□□ 15.1
RPS3P23396 NAGLU-205ENST00000592454 582 ntTSL 215.44■□□□□ 0.063e-9■■■□□ 15.1
RPS3P23396 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.059e-8■■■□□ 15.1
RPS3P23396 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.31■□□□□ 0.043e-7■■■□□ 15.1
RPS3P23396 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.029e-8■■■□□ 15.1
RPS3P23396 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.023e-7■■■□□ 15.1
RPS3P23396 SCAMP2-210ENST00000569124 538 ntTSL 415.09■□□□□ 0.013e-7■■■□□ 15.1
RPS3P23396 ZFP36L1-205ENST00000557022 577 ntTSL 515.04■□□□□ -03e-7■■■□□ 15.1
RPS3P23396 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15□□□□□ -0.013e-7■■■□□ 15.1
RPS3P23396 HS6ST1-203ENST00000469019 559 ntTSL 414.75□□□□□ -0.053e-7■■■□□ 15.1
RPS3P23396 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.58□□□□□ -0.083e-7■■■□□ 15.1
RPS3P23396 SLC4A2-209ENST00000472204 994 ntTSL 514.56□□□□□ -0.083e-7■■■□□ 15.1
RPS3P23396 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.083e-7■■■□□ 15.1
RPS3P23396 SUN1-218ENST00000450881 513 ntTSL 414.49□□□□□ -0.093e-7■■■□□ 15.1
RPS3P23396 JUP-210ENST00000585793 598 ntTSL 214.29□□□□□ -0.123e-7■■■□□ 15.1
RPS3P23396 ATF6B-215ENST00000492342 819 ntTSL 313.94□□□□□ -0.183e-9■■■□□ 15.1
RPS3P23396 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.192e-15■■■□□ 15.1
RPS3P23396 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.75□□□□□ -0.213e-7■■■□□ 15.1
RPS3P23396 SUN1-201ENST00000340926 2128 ntTSL 513.72□□□□□ -0.213e-7■■■□□ 15.1
RPS3P23396 SEC23B-205ENST00000422877 834 ntTSL 313.56□□□□□ -0.243e-7■■■□□ 15.1
RPS3P23396 ATF6B-213ENST00000475705 561 ntTSL 213.37□□□□□ -0.273e-9■■■□□ 15.1
RPS3P23396 SLC1A2-206ENST00000479543 564 ntTSL 513.16□□□□□ -0.33e-7■■■□□ 15.1
RPS3P23396 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.333e-7■■■□□ 15.1
RPS3P23396 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.353e-9■■■□□ 15.1
RPS3P23396 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.68□□□□□ -0.389e-8■■■□□ 15.1
RPS3P23396 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC12.51□□□□□ -0.413e-7■■■□□ 15.1
RPS3P23396 ERLIN2-207ENST00000519872 550 ntTSL 412.45□□□□□ -0.423e-7■■■□□ 15.1
RPS3P23396 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.423e-9■■■□□ 15.1
RPS3P23396 SUN1-234ENST00000493681 526 ntTSL 312.21□□□□□ -0.453e-7■■■□□ 15.1
RPS3P23396 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.463e-9■■■□□ 15.1
RPS3P23396 ASPH-205ENST00000445642 3717 ntTSL 2 BASIC12.1□□□□□ -0.473e-7■■■□□ 15.1
RPS3P23396 ASPH-208ENST00000517856 6337 ntTSL 2 BASIC11.8□□□□□ -0.523e-7■■■□□ 15.1
RPS3P23396 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.533e-7■■■□□ 15.1
RPS3P23396 SUN1-214ENST00000435699 676 ntTSL 311.67□□□□□ -0.543e-7■■■□□ 15.1
RPS3P23396 TMEM205-213ENST00000590788 393 ntTSL 311.58□□□□□ -0.563e-7■■■□□ 15.1
RPS3P23396 DPY19L1-201ENST00000310974 4870 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.583e-7■■■□□ 15.1
RPS3P23396 ASPH-201ENST00000356457 3730 ntTSL 1 (best) BASIC11.11□□□□□ -0.633e-7■■■□□ 15.1
RPS3P23396 ERLIN2-204ENST00000518526 663 ntTSL 310.86□□□□□ -0.673e-7■■■□□ 15.1
RPS3P23396 ERLIN2-206ENST00000519638 1718 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.693e-7■■■□□ 15.1
RPS3P23396 ERLIN2-203ENST00000397228 1473 ntTSL 1 (best) BASIC10.61□□□□□ -0.713e-7■■■□□ 15.1
RPS3P23396 MTRNR2L4-201ENST00000399974 1762 ntAPPRIS P1 BASIC10.52□□□□□ -0.737e-13■■■□□ 15.1
RPS3P23396 SUN1-230ENST00000477950 575 ntTSL 310.42□□□□□ -0.743e-7■■■□□ 15.1
RPS3P23396 EMC3-204ENST00000487465 1909 ntTSL 1 (best)10.23□□□□□ -0.773e-7■■■□□ 15.1
RPS3P23396 ERLIN2-209ENST00000521993 764 ntTSL 39.52□□□□□ -0.893e-7■■■□□ 15.1
RPS3P23396 EMC3-201ENST00000245046 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.913e-7■■■□□ 15.1
RPS3P23396 EMC3-202ENST00000429759 751 ntTSL 3 BASIC9.3□□□□□ -0.923e-7■■■□□ 15.1
RPS3P23396 MESD-204ENST00000560189 936 ntTSL 59.24□□□□□ -0.932e-15■■■□□ 15.1
RPS3P23396 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.023e-7■■■□□ 15.1
RPS3P23396 ERLIN2-210ENST00000523107 771 ntTSL 3 BASIC8.05□□□□□ -1.123e-7■■■□□ 15.1
RPS3P23396 PLCB1-219ENST00000630495 759 ntTSL 57.87□□□□□ -1.153e-7■■■□□ 15.1
RPS3P23396 PLCB1-212ENST00000625874 3206 ntTSL 27.4□□□□□ -1.223e-7■■■□□ 15.1
RPS3P23396 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.27□□□□□ -1.253e-7■■■□□ 15.1
RPS3P23396 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.293e-7■■■□□ 15.1
RPS3P23396 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.413e-7■■■□□ 15.1
RPS3P23396 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.493e-7■■■□□ 15.1
RPS3P23396 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.69□□□□□ -1.53e-7■■■□□ 15.1
RPS3P23396 PACSIN2-211ENST00000507586 362 ntTSL 35.61□□□□□ -1.519e-8■■■□□ 15.1
RPS3P23396 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.513e-7■■■□□ 15.1
RPS3P23396 SLC1A2-207ENST00000531628 597 ntTSL 54.88□□□□□ -1.633e-7■■■□□ 15.1
RPS3P23396 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.28□□□□□ -1.723e-7■■■□□ 15.1
RPS3P23396 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.782e-9■■■□□ 15.1
RPS3P23396 DPY19L1-206ENST00000481923 566 ntTSL 42.41□□□□□ -2.023e-7■■■□□ 15.1
RPS3P23396 SUN1-228ENST00000471349 569 ntTSL 41.53□□□□□ -2.163e-7■■■□□ 15.1
RPS3P23396 ACAA1-215ENST00000469600 876 ntTSL 214.21□□□□□ -0.131e-6■■■□□ 15.1
RPS3P23396 NDRG1-210ENST00000518480 558 ntTSL 416.52■□□□□ 0.249e-8■■■□□ 15.1
RPS3P23396 NDRG1-211ENST00000519228 729 ntTSL 414.47□□□□□ -0.099e-8■■■□□ 15.1
RPS3P23396 NDRG1-206ENST00000518010 581 ntTSL 413.13□□□□□ -0.319e-8■■■□□ 15.1
RPS3P23396 NDRG1-214ENST00000520230 582 ntTSL 412.86□□□□□ -0.359e-8■■■□□ 15.1
RPS3P23396 OS9-217ENST00000550848 558 ntTSL 511.05□□□□□ -0.647e-7■■■□□ 15.1
RPS3P23396 AP2B1-218ENST00000619183 1595 ntTSL 511.23□□□□□ -0.612e-6■■■□□ 15.1
RPS3P23396 SRA1-202ENST00000520427 978 ntTSL 1 (best)15.14■□□□□ 0.012e-6■■■□□ 15.1
RPS3P23396 SRA1-205ENST00000602775 1466 ntTSL 1 (best)14.44□□□□□ -0.12e-6■■■□□ 15.1
RPS3P23396 SRA1-203ENST00000523259 1802 ntTSL 514.29□□□□□ -0.122e-6■■■□□ 15.1
RPS3P23396 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.172e-6■■■□□ 15.1
RPS3P23396 SRA1-206ENST00000602875 769 ntTSL 211.66□□□□□ -0.542e-6■■■□□ 15.1
RPS3P23396 ANKRD30BL-204ENST00000470729 1425 ntTSL 1 (best)17.23■□□□□ 0.352e-7■■■□□ 15.1
RPS3P23396 FLNB-213ENST00000491408 475 ntTSL 35.48□□□□□ -1.532e-13■■■□□ 15.1
RPS3P23396 TKT-209ENST00000466765 693 ntTSL 217.04■□□□□ 0.329e-10■■■□□ 15
RPS3P23396 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.8■□□□□ 0.284e-7■■■□□ 15
RPS3P23396 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.51□□□□□ -0.094e-7■■■□□ 15
RPS3P23396 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.21□□□□□ -0.134e-7■■■□□ 15
RPS3P23396 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.214e-7■■■□□ 15
RPS3P23396 OS9-203ENST00000389142 2457 ntTSL 5 BASIC13.57□□□□□ -0.244e-7■■■□□ 15
RPS3P23396 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.51□□□□□ -0.254e-7■■■□□ 15
RPS3P23396 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.294e-7■■■□□ 15
RPS3P23396 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.16□□□□□ -0.34e-7■■■□□ 15
RPS3P23396 OS9-202ENST00000315970 2691 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.54e-7■■■□□ 15
RPS3P23396 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.312e-10■■■□□ 15
Retrieved 100 of 24,271 protein–RNA pairs in 259.4 ms