Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.24■□□□□ 0.35
KRT4P19013 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.24■□□□□ 0.35
KRT4P19013 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.24■□□□□ 0.35
KRT4P19013 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.24■□□□□ 0.35
KRT4P19013 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT4P19013 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT4P19013 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.24■□□□□ 0.35
KRT4P19013 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT4P19013 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
KRT4P19013 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT4P19013 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT4P19013 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT4P19013 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.24■□□□□ 0.35
KRT4P19013 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
KRT4P19013 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
KRT4P19013 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
KRT4P19013 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
KRT4P19013 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT4P19013 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT4P19013 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT4P19013 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
KRT4P19013 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT4P19013 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.23■□□□□ 0.35
KRT4P19013 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT4P19013 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT4P19013 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT4P19013 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT4P19013 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT4P19013 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT4P19013 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT4P19013 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT4P19013 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
KRT4P19013 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
KRT4P19013 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.23■□□□□ 0.35
KRT4P19013 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT4P19013 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT4P19013 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT4P19013 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT4P19013 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT4P19013 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
KRT4P19013 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.23■□□□□ 0.35
KRT4P19013 COX11P1-201ENST00000489116 835 ntBASIC17.23■□□□□ 0.35
KRT4P19013 AC005332.3-201ENST00000589904 676 ntBASIC17.23■□□□□ 0.35
KRT4P19013 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
KRT4P19013 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
KRT4P19013 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT4P19013 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT4P19013 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT4P19013 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT4P19013 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT4P19013 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT4P19013 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT4P19013 HLA-A-202ENST00000376806 1854 ntBASIC17.22■□□□□ 0.35
KRT4P19013 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
KRT4P19013 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT4P19013 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
KRT4P19013 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT4P19013 FRMD8P1-201ENST00000440433 1524 ntBASIC17.22■□□□□ 0.35
KRT4P19013 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.22■□□□□ 0.35
KRT4P19013 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT4P19013 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT4P19013 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT4P19013 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT4P19013 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT4P19013 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT4P19013 SLC25A3P1-201ENST00000443844 931 ntBASIC17.22■□□□□ 0.35
KRT4P19013 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT4P19013 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.22■□□□□ 0.35
KRT4P19013 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.22■□□□□ 0.35
KRT4P19013 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
KRT4P19013 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT4P19013 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT4P19013 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT4P19013 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT4P19013 AL049757.1-201ENST00000616842 1596 ntBASIC17.22■□□□□ 0.35
KRT4P19013 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT4P19013 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT4P19013 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
KRT4P19013 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT4P19013 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT4P19013 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT4P19013 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT4P19013 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.22■□□□□ 0.35
KRT4P19013 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT4P19013 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT4P19013 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT4P19013 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
KRT4P19013 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.21■□□□□ 0.35
KRT4P19013 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.21■□□□□ 0.35
KRT4P19013 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.21■□□□□ 0.35
KRT4P19013 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms